Magnolia sinica: 131256041
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Entry
131256041 CDS
T09699
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
msin
Magnolia sinica
Pathway
msin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131256041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131256041
03036 Chromosome and associated proteins [BR:
msin03036
]
131256041
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131256041
Coactivators
SAGA/TFTC/STAGA complex
131256041
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131256041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
DUF7952
Motif
Other DBs
NCBI-GeneID:
131256041
NCBI-ProteinID:
XP_058113022
LinkDB
All DBs
Position
9:complement(90098109..90114432)
Genome browser
AA seq
978 aa
AA seq
DB search
MDPLIVKLLEDDEDENIHSGKDVEALTAALNRDIGGESGDTSISQSVDLDAGVSSHGSNS
LRNQLLGQTQTSSQEDLTRQDQQEKEHHPQPHEQLSSGMELLLRGSRVETQHKQDGHPLE
TDKLLVQHNQSEDDRQHQQPEQNTLQLSENKQATQISEKNPGQHSEEDIQKFQNSESQQQ
QSKVQQLDNQNTPAADQAHKPMAGNKSNCNIPVHKLIPIFCPHLDKDRQMQLQDSFARLR
KNEIGRDDFLRTLRNIVGNELLMSALQKLQQQEHQVRAQVQAARNSQTSPGQYPLQSQAS
SQQLTMPSNPAQQLTEDKTVSQLHPSIQHQKGSGSPAHLSYIPSSTVEMQKDACMPTSQN
SAQKPRETEHQSDVQVSHTPSSANTIAGNQETEPSMVSVQTVTKQQQLPRPMISWYRDPA
SNYSTHPYPGPSVSVAAASTKSQTQGPQIRQVLHPQGMASIQRAASQPKNQTNVRRYELR
SAMNEAKKVHGGSPPNLTSNSSLDPNACQSSSNKDQTSSSSSPTTFPKQELVDQMAKQQL
MPPLSAPQSSSSFGAIHIGRGNPALGPLRDDSIEKQSARMGFPTPMNMMTRHQNSGPVST
QPEHMMQMRSQNPSATTPVGTGTNVRTPSKKPSVGQKKPLETLGTPSPQSSKKQKVSGAP
VDESIEHLNDVTSVSGVNIREEEEQLLSALKEESHASEANRRVVQEEEERLILQKVPLQK
KISEIMSKCGIKNMRNDVERCLSMCVEERMRGLINNLIRLSKQRVDIEKPRHSIFITSDV
RSQILMMNRKAKEEWDKKQAEEAEKLRKNNETEGNTGADVDKDKDEGRVKAPKANKEEDD
KMRTTAANVAARAAVGGDDMLSKWQLMAEQARKKREGGQDGASGAPGKDTNPRRPLQIYG
KTSRDNQEAEHRVPSLAATACGATKKFGWNQPIMSQAKIMRTISVKDVIAVLEREPQMAK
STLIYRLYERMHADAAAE
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttgattgttaagcttcttgaggatgatgaggatgagaacatacattctgga
aaggatgtggaggcattaacagctgccttaaacagagatattggaggagagtcaggagac
acgtctatttctcagtctgttgatctagatgctggagtatcgtcccatggaagcaattca
ttgcggaatcaattacttggacaaactcaaacttccagtcaagaagatcttacacgccaa
gatcaacaagaaaaagaacatcatccacagccacatgagcaactttcatctggaatggag
ctactactgcgtggatctagagttgagactcagcacaaacaagatggccatccactggaa
actgataagctgctagtgcagcataaccagtctgaagatgaccggcaacatcaacagcca
gagcaaaatacacttcagctatctgaaaacaagcaggccactcagatttctgaaaaaaat
cctggtcagcattcagaagaggatattcaaaagtttcagaactccgaaagccaacaacaa
caatcaaaagtacagcagttggataatcaaaacacaccagcagcagaccaagcacataaa
ccaatggcggggaataaatcaaattgtaacatacctgttcacaagttgattccaattttt
tgtcctcatcttgataaagatagacaaatgcagcttcaggatagttttgctagattgagg
aaaaatgaaattggcagagacgactttctgaggactttgagaaatattgtggggaacgag
ttgctcatgtctgcacttcagaagttacagcagcaggagcatcaggttcgagctcaagtt
caggctgcacgaaactcgcagacaagtcctggtcaatatccgctacagtctcaagcttca
tcccagcagcttaccatgccatctaatcctgctcaacagttaactgaagacaaaacagtt
tcacaacttcatccatcgatccaacatcagaaaggatccggatctcctgcacatctgtct
tatattccatcttcgacagttgaaatgcagaaggatgcatgcatgccaacctcacaaaac
agtgctcagaagcccagggagacggaacatcagtctgatgtgcaggttagccacactcca
tcctctgcaaacactattgcaggtaatcaagaaacggaaccttctatggtctcagttcag
acagttaccaagcaacaacagcttcctcgtccaatgatttcttggtatcgggatccagct
agtaattatagtacacatccatatcctgggccttccgttagtgttgctgcagcttctact
aaatcccaaactcaaggtccacaaataaggcaagttctgcatccccaaggcatggcttca
attcaacgcgctgcatctcagcccaagaaccaaaccaatgtgcgccggtatgagctaaga
agtgcaatgaatgaagccaagaaggtgcatggtggatctcctcctaacctgacaagtaat
tcatcactagatcctaatgcatgtcaatcatcatcaaataaagaccagacaagtagcagt
tcatcaccgacgacttttccgaaacaggaactggttgatcagatggctaaacaacagctc
atgcctccattatcagctccacagagctcctcttcttttggggcaatacacattggccga
ggaaacccagctcttggtcctttgagggatgattccattgagaagcaatcagctagaatg
ggctttcctacccctatgaacatgatgaccagacatcaaaattcaggtcctgtttcaaca
caaccagaacatatgatgcagatgaggtctcaaaacccatctgcaaccacaccagttggg
actggaactaatgtgaggacaccgtctaagaaaccatctgttggtcagaagaaaccactt
gaaacacttggcactccctcaccacagtccagtaaaaagcaaaaggtatcaggggcgcct
gtagatgaaagcattgaacatctcaatgatgttacttctgtcagtggagttaatataaga
gaagaggaagagcagctactttctgcactgaaggaggaaagccatgcttcagaagcaaat
cgaagggttgtacaagaggaagaagaaaggctgattctgcagaaggtccctcttcagaag
aaaatatcagaaatcatgtctaaatgtgggataaagaatatgaggaatgacgtggagcgt
tgcctctcaatgtgtgttgaggaacgaatgcgtgggttgataaataaccttataagacta
tcgaaacagagggttgacattgaaaagccaaggcactcgatttttataacttcagatgtt
cgaagccaaattttaatgatgaacaggaaggccaaggaggagtgggacaaaaagcaagct
gaggaggctgaaaagctccggaaaaacaatgaaactgagggaaacacaggagctgatgtg
gacaaggacaaggatgaaggtcgtgtaaaggctcccaaggcaaacaaggaagaagatgat
aaaatgcgaacaacggctgcaaacgttgctgcacgagctgctgttggaggggatgacatg
ctatcaaaatggcaactcatggctgagcaagctcggaagaagcgcgaaggggggcaggat
ggggcatctggtgcaccagggaaagatacaaacccccgcaggcctttgcagatatatgga
aaaaccagcagggacaaccaagaagctgaacacagagttccctctttggctgctactgca
tgtggggctacaaaaaaattcgggtggaaccaaccaatcatgtctcaggcaaaaatcatg
cgtaccatttcagttaaggacgtgatcgcagtcttagaaagggagccacagatggcaaag
tcgactttaatctatcgcttgtatgagagaatgcatgctgatgctgcagcagaatag
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