Magnolia sinica: 131256890
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Entry
131256890 CDS
T09699
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
msin
Magnolia sinica
Pathway
msin03420
Nucleotide excision repair
msin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131256890
09124 Replication and repair
03420 Nucleotide excision repair
131256890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
msin03051
]
131256890
03400 DNA repair and recombination proteins [BR:
msin03400
]
131256890
Proteasome [BR:
msin03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
131256890
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
131256890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_3
Dsc3_N
Ubiquitin_4
UBA_RAD5A
Crinkler
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
131256890
NCBI-ProteinID:
XP_058113957
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Position
9:11472678..11526473
Genome browser
AA seq
392 aa
AA seq
DB search
MKLTVKTLKGSHFTIQVQPNDTVMAVKKNIEEAQGKNSYPCGQQLLIHNGKVLKDESTLE
ENKVSEDGFLVVMLSKSKTTGTSGASSTQPPPTTTTAPASLPVSLQEAPPQAPAATSAAT
STATTTATTTATGSETAAPEVQADVYGQAASNLVAGNTLEQMIQQMIDMGGGSWDRETVM
RALRAAYNNPERAVEYLYSGIPAAAEVAVPVARVPSNQASAQGANAATTEADLAGVAPLS
GLPNSAPLNLFPQGAPNPGTGGGAGSLDFLRNNQQFQALRSMVQANPQILQPMLRELSKQ
NPQLLRLIQEHHAEFLQLINEPLEGAEGDLFEPAEQDMPHSISVTPAEQEAIERLEAMGF
DRALVIEAFLACDRNEELAVNYLLENAGDYED
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggtgaagacgctgaaaggcagccacttcacaatccaggtgcagccaaac
gacacggttatggctgtaaagaagaatattgaagaggcacaaggtaaaaacagctatcct
tgtgggcaacaattattgattcataatggaaaggtcttaaaagacgagagtactttggag
gagaacaaagtcagtgaagatggttttcttgttgtcatgcttagcaagagcaaaaccaca
ggtacatctggagcctcatccactcagccgcctccaacaacaacgacagcaccagcttct
cttcctgtttctctgcaggaggcccctccacaagcacctgctgcaacgagcgctgcaacg
agcactgcaacgaccactgcaacgaccactgcaactggttctgaaactgcagcaccagaa
gtgcaggctgatgtatacggtcaagctgcatccaatctggtcgcgggtaatactcttgag
cagatgattcaacaaatgatagatatgggcggaggtagctgggaccgagagacagtcatg
cgtgcacttcgtgcagcttacaacaatccagagcgagctgtggaatatttatattctggt
attccggcagcagcagaagttgctgttccagtagctcgagttccctcaaatcaggcatca
gcccaaggggccaatgccgcaacaactgaagccgatttagcaggggtggcacctctctcc
ggattacccaattcggctccattgaatctgtttccgcagggagctcccaatcccggtact
ggtggcggagctggatctcttgatttccttagaaataaccaacagttccaagctctgcgt
tcgatggtccaagcaaatccacaaattctacagccaatgcttcgtgagctaagcaaacag
aatccacaacttctgagactaattcaagaacaccatgctgagtttcttcaattaataaat
gagccccttgagggtgctgaaggggatctgtttgagccagctgagcaggacatgccccat
tcgatcagcgtgacaccagcagaacaggaggctattgagcgacttgaagcaatgggattt
gacagagctcttgtgatcgaggcattcctagcctgtgacaggaacgaagaattggcagtg
aactatttattagagaatgctggtgactatgaagattga
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