Magnolia sinica: 131257795
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Entry
131257795 CDS
T09699
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131257795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131257795
03036 Chromosome and associated proteins [BR:
msin03036
]
131257795
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131257795
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131257795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
131257795
NCBI-ProteinID:
XP_058114679
LinkDB
All DBs
Position
1:complement(127115002..127133899)
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AA seq
720 aa
AA seq
DB search
MPGRASDPGDSLVPFSPEVKDPVVHTLHHGLKPPIARLSISWSRGNSLLVAFFRKPSPES
GAEDSGDEIGGKVVEVKLSAGDGEIDDAQKRRIAYGSAPAFALLQSQRISVSAVSKMPFG
SSSYRTEWWQHVLEYSKHISSFLGSPKPPTMSVIEDPRTVMKFLQSDEEPTCLKAAWELL
EIFYVDKQLLSWLPEHLVDWLADYDSLLSRTESTVHSKLVNLQKKLVNLQIVEDDPEYWE
GMSSALAVGWLDIVVKLLRLHGSYQLDQLAHRETENGLVEAVVVLVSTMPRMRPKLAAEG
LGQCFKTKPDFIKAWEKWRGQIAKLDCSAFWIQCENRQTKEGLKNLLQVMLGNTSILAAA
TCHWMELFISHFLYVRPFTVGLEGMHSLAQKCMQLKPVSTSHRLMGLILGILGENTEVVL
AECSRSFGPWMVVHAIELLMADNRQAEVLLHEERYNLGGINIEELHRLVYAQVLSSNALT
WQIAPFYLASCKKQGLGLLEILLYAQPVQHNQMMLKTLDICRLYELNNISLSIMKIAGMH
HWKHGRKGAGVFWLKQAQDEVRLNRIAQQLFEFVGKSVSDDSFKQWEGLIELMGSEARTA
GGLEFLHKYRDFKKSLQKVQDKKASDAARQAIDSLILLMKNPSTPERFWLPLLHDSLKFL
NWRERPLLNVSETNLLLGKLQELSLARLRPDFCDADLPPQALSSVRLALATNLGRAILEE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccaggccgtgcgtcagatcccggcgactctctcgttcctttctcgccggaagttaaa
gatccggtcgtccacactctccaccatggtcttaaacccccaattgctcgcctttccatc
tcctggtcccgcggaaactccctcctcgtcgccttcttccggaaaccatctccggaatcc
ggcgccgaggattccggcgatgaaatcggcgggaaagtggtcgaggtgaagctcagtgcc
ggagacggtgaaatcgacgacgcgcagaagcggaggatcgcttacggatcggctccagct
ttcgcgctccttcagagccagcggatttctgtctcagcagtgtcgaaaatgccgtttggt
tcgtcttcatatcgcactgagtggtggcagcatgttttggagtacagcaagcacataagt
tcttttctaggatctccaaagcctcctacaatgtcagtgatcgaggacccaaggacagtt
atgaagtttctgcagtcagatgaggagccaacctgtttgaaggcagcatgggagctgttg
gaaatattttatgtggacaagcaattgctgtcttggctcccagagcaccttgttgattgg
ttagcagattatgatagtctcctttccaggacagagtcaactgttcattcaaagcttgtg
aacctgcagaagaaacttgtcaatttacagattgttgaggatgatcctgaatactgggaa
gggatgtcatcagcactggcagttggttggcttgacattgtggtgaaactattgagattg
catgggtcttatcaactggatcagcttgcccatcgtgagacagaaaacggactggtggaa
gcagtcgttgttcttgtgtcgacaatgccacgcatgcgtcctaagttagctgctgaagga
ttaggtcaatgctttaaaaccaagccagattttatcaaggcttgggagaagtggcgtggc
caaatagccaagctagactgcagtgcattttggattcaatgtgaaaaccgacagaccaag
gaaggtttgaagaatctgttacaagtcatgttgggaaatactagcattcttgctgctgca
acgtgccattggatggagctgtttatatcccactttctctatgttaggccattcacagtg
ggtttagaaggcatgcatagcttagctcagaaatgcatgcagttgaaaccagtgtccacc
tcccatagattgatggggcttatacttggaattcttggggaaaatactgaggttgttctg
gcagaatgctctagatcatttggcccttggatggttgtccatgctatagagttgttgatg
gccgataacaggcaagctgaggttcttttacatgaagagcgctacaatttgggaggaatc
aacatagaggagctccatcgacttgtctatgctcaagttctatcttctaatgctttaact
tggcaaattgctcctttttatttagcatcatgcaaaaagcaaggtttgggtttgttggag
attttgttgtatgcacagcctgtacaacacaatcagatgatgctaaagactctagacatt
tgccgtttatacgaactcaacaacatcagcttaagcattatgaagatagctggaatgcat
cactggaaacatggtaggaaaggggctggagttttctggctcaagcaagctcaggatgaa
gttcggctcaatagaatcgctcaacagctgttcgagtttgtcggaaagtcagtttctgat
gatagtttcaagcaatgggaaggattgattgaattaatgggttcagaagccaggaccgct
ggtggccttgagtttcttcacaagtatagggacttcaagaaatcccttcagaaggttcaa
gataaaaaggcttctgatgctgctcgacaagctatagactctcttatattgctcatgaag
aacccatcaacaccagagcgtttctggctgcctcttcttcatgattcgttgaaatttctt
aactggcgggagcgacctctgctgaatgtttccgaaaccaacctgttgttgggcaaactg
caagagctgtccttggctaggcttcgcccagatttctgtgatgctgacctgccgcctcag
gccctgagttctgtcagactggctctggccacaaatctcggccgggctattctcgaggag
tga
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