Magnolia sinica: 131258128
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Entry
131258128 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131258128
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
msin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131258128
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131258128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131258128
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
131258128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
131258128
NCBI-ProteinID:
XP_058115208
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Position
10:complement(19714330..19758177)
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AA seq
673 aa
AA seq
DB search
MEDGDGNFDSGDRNDQFHRNEAISAVADDGFLGEEEEDDYEDLYNDVNVGDGFLQTLKRE
DETDEIKPKIEPSASIPGVGGGSGIGSGSGIGKTIKKEVIEEELKAPPELGFRGKTIKKE
VVEEELKGPPELGFRGNELGMRGPRVKVEMGEPLGKFGEIQGQFGNSNPQHGVGVGNAFV
NANVNIANVNGGGGPAVGGGVTVGAGPAPAAGGVPGASNMGGTVLYVGELHWWTTDAQLE
SELSKYGPVKELKFYDEKASGKSKGYCQVEFYDAAAAAACKEGMNGHIFNGRPCVVAFAS
PYSVRRMGEAMVNKNQAMGAAQTGPIQGRRGPADVGGRGGGIGSGTNYQNFGRGGWGRGG
GGMANRGPIGPMRNRVGMGGRGIIGNNGNGFGQGLAAAPPPLLQPQAMMGQGFDPTYGAT
MGRMGGGYGGFPAAPMPPFSGVLSSFPAMGGVGLPGVAPHVNPAFFGRGMPANGMGMMPA
TGVENVGMWSDPSMGGWAGEDQGGRAGESSYGEDAVSDHQYGETGGHEKGGWSNATREKD
RAPERDLSGGAPDRRYRDDREPGWDRDAPRERDTGRDQEWSERRHRDDREAGWDRDRDRD
RDRDRDRDRYREDRERYSDHPRYRDREPEHDDEWDRGRSSRSHHGKSRLPHEEEQRQRLR
DVEHGKRRRLPSE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggggacggcaatttcgacagcggagatcggaacgatcagttccaccggaac
gaggcgatctcagccgttgctgacgacgggtttttgggggaagaagaagaagacgactac
gaagatctctacaacgatgtgaatgtaggcgacggattcctccagactttgaaacgagag
gatgagactgacgagatcaagccgaagattgaaccgtctgcttcgatcccaggcgttggc
ggtggcagcggcattggcagtggcagcggcattgggaagactattaaaaaagaagttata
gaggaagaattgaaagctcctccggagttgggtttcagaggcaagactattaaaaaggaa
gttgtagaggaggaattgaaggggccgccggagttgggtttcagagggaatgaattgggc
atgagaggtcccagagtgaaagttgaaatgggtgagcccttgggtaaatttggtgaaatc
caagggcaatttggtaatagcaatcctcaacatggagtaggagttgggaatgcttttgtt
aatgccaatgttaatattgctaatgttaatggtggaggtggaccagccgttggaggtggg
gtcactgttggagctgggcctgcccccgcagccggaggtgtgcctggagccagcaacatg
ggtgggacggtcctgtatgttggggaactgcattggtggacgacggatgcccaactcgag
agtgaactttcgaagtatggcccggtgaaggagttgaagttctatgatgagaaggccagt
gggaagtcgaaggggtactgccaggtggagttctacgatgctgctgctgcagctgcctgc
aaagaagggatgaacggccacattttcaacgggcgtccatgcgttgttgcattcgcgtcg
ccatatagcgtgcgtaggatgggcgaggccatggtgaacaagaaccaggcgatgggggct
gcacagacgggccctattcaggggcggagagggccggctgatgtcggaggtagaggtggt
ggaattgggtcaggcactaattatcaaaattttgggaggggcgggtggggaaggggtggg
ggagggatggcaaatagagggccgattgggccgatgaggaacagggttgggatggggggg
aggggtataattggaaacaatggtaatgggtttgggcaagggctcgcagcagcgccaccg
ccattgttgcaacctcaggcgatgatgggtcaggggtttgatccaacgtatggagcgaca
atggggagaatgggtggtggttatggtggtttccctgcagcccccatgccccctttctcg
ggggtattatcgtctttcccagcaatgggtggtgtgggtttgcctggtgtggctccacat
gtgaatccagcattttttggaagagggatgccggcaaatggaatgggtatgatgcctgca
acaggtgttgagaatgtgggaatgtggtcggatccgagcatgggtggatgggcaggtgaa
gaccagggtgggagagcgggagagtcaagttatggggaggatgctgtgtcggaccatcag
tatggagagacaggtggccatgagaaagggggatggtcaaatgctacgagggagaaagat
agggccccagagcgggacttatctgggggtgctcctgatagacggtatcgtgacgatagg
gaaccggggtgggatcgggatgcgccgagggagagagatactggtcgtgatcaggagtgg
tcagagagaaggcatcgtgacgatagagaagcaggatgggaccgtgaccgggaccgtgac
cgggaccgcgaccgcgacagggatcgttatagggaggatagagagagatattcggatcac
cctagatacagggaccgtgaaccagagcatgatgacgagtgggataggggacggtcgtcg
aggtctcatcacggcaagtcacggctgccacatgaagaagagcagcgccaaaggttgagg
gatgttgaacacgggaagcggaggcggttaccatcagagtaa
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