Magnolia sinica: 131258196
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Entry
131258196 CDS
T09699
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
msin
Magnolia sinica
Pathway
msin00240
Pyrimidine metabolism
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
131258196
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
131258196
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
131258196
NCBI-ProteinID:
XP_058115299
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Position
10:complement(23948838..24013519)
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AA seq
432 aa
AA seq
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MSSSSALSRLANLQKHFHRTQQGSKDNIGRGHVKIAPEVSNALSHGRAVVALESTIISHG
MPYPQNLETAKEVESIIKENGAVPATIAILDGVPCIGLSNEELQRLANLGKKAQKTARRD
IPHIVGIPVFVTGGIGGVHRHGENTMDISSDLTELGRTPVAVISAGVKSILDIPRTLEYL
ETQGVPVVAYKAQEFPAFFTESSGCEVPCRLDSPEECAQLIHASIKLRLGAGVLIGVPIP
KEHAASGSLIESAIQRALKEARDNKVTGNAETPFLLARVNELTGGASLAANIALVKNNAL
LGAKIAVALANLRQRSNSMLILVELLLLVVMAAPTLYAACYACHHCQVKMLLAPRLLGVM
TCGPLVNGPTMDRVCPKKYLDWRIPMNDIWPFILLNSDCFCISFLNHLYELPNQRVKIFQ
SRRFLWEEFDDP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcctcagcactttcaaggctggccaatctacaaaaacattttcaccgcaca
cagcagggcagcaaggacaacattggacgagggcatgtgaagatagccccagaagtttca
aatgcgctttcacatggacgtgcagttgttgctttggagtctacaataatatcccatggc
atgccctatcctcaaaatctggagactgcaaaagaagttgagtcgatcataaaggagaat
ggggcagttccagcaacaattgctattttagacggtgttccttgcattggtctcagtaat
gaagaattgcagaggttagctaatcttggtaaaaaagctcaaaagacagctcgcagggac
attccacatattgttggcatacctgtgtttgttactggggggattggaggggtgcataga
catggagaaaacaccatggatatatcttccgatctcaccgagcttgggaggacaccagtg
gcagttatctctgctggtgtaaagtcaattttagatattcctagaacccttgagtacttg
gaaactcaaggtgttccagtggttgcttataaagcccaagaattcccagcattttttacg
gaatccagtggctgcgaggtgccttgtcgtctggatagtccagaggagtgtgctcaactc
atacatgcaagcatcaaactcagactaggagccggcgttctgattggggtgcccattcct
aaagaacatgcagcctctggaagtttgatagaatctgccatacaaagagcccttaaagaa
gccagggataataaggtgactggaaatgctgagacacctttcttgcttgcgagagtaaat
gaacttacgggaggagcttcactagctgcaaacatcgcacttgtaaagaacaatgcacta
cttggagcaaagattgccgttgctcttgccaacctcagacaaagaagtaatagcatgttg
atattggtggaactgttactactggtggtgatggcagcgcctaccttgtatgccgcttgc
tatgcatgccatcattgtcaagtcaagatgcttttagctccacgcctgttgggggtcatg
acttgcggaccattggtcaatggacccaccatggacagggtttgtcccaaaaaataccta
gattggaggatcccaatgaatgatatttggccctttattctgttaaattcggactgtttc
tgtatttcttttcttaaccatctatatgaactccccaatcaaagggttaagatcttccag
tctaggaggtttttgtgggaggaatttgatgatccttga
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