KEGG   Magnolia sinica: 131258223
Entry
131258223         CDS       T09699                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
msin  Magnolia sinica
Pathway
msin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    131258223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msin03400]
    131258223
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     131258223
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM EBNA2_Core
Other DBs
NCBI-GeneID: 131258223
NCBI-ProteinID: XP_058115353
LinkDB
Position
10:27757886..27800545
AA seq 1526 aa
MGVQGLWELLAPVGRRVSVETLAGKRLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRDNAQAKIRKTAEKLLLNHLKARKLE
ELAKDIQIRKEKDSSKGKQVLPDYDDLKENNPERNETDNRTYNQESLDQLLAASLAAEEN
GNFTGNASTSMLGNPPEEEDDGDENEEMIFPVMPGKVDPTVLAALPPSMQLDLLVQMREQ
LMAENRQKYQKVKKAPSKFSELQIQAYLKTVAFRREIDEVQKSAAGREVGGMQASRIASE
PNREFIFSSSFTGDKRILTSAGVEENRDAEHQTLGKEPAHSASVDSISSTSQIHSVAVAD
VDEPTRGFNPDVETYIDERGRIRVSRLRGLGIRMTRDLQRNLDLMKEFEQEKQKENSWAY
AEAIGRSNILGASKVLPENNHAPEALIGDEANDETVNLIGRTDGPLIQEGENHHSHEQST
HGGKTSIEISFFEGDNGPSGTDVDDLFARLVTGSSKFSSESVPSGKYSCDISSDSALAEG
VLDEGSFRNDVEERQPSLLDDSNCDEGEVDWEEGVCQVPTNVSTSPTEHQKAFSRGFLEE
EAEVQEAIRRSLEDIRKEKSILLSSGRKDVENYKDVHSPNIPFENGIVRSQKSHETVERF
GRLENGDQRDILQINDSPDKQLASSIKLGVRTDGKSVEMDKDGQIYKACNDGVCKDRSDC
IETPYSDLVTLEPMEAPITGQEQCLYNPNEGKSIPSFTDCTDGSSKVISHIPEPVESDLT
DVILADTNQNDLQASHSRHSFEIGNDYSDFQEGSSTEKMATENDREREPISGKIDSILPD
EGDKNIHNLNLEFQAEASETSLDEEMLLLQQERMDLGDEQRKLERNAESVSSEMFAECQE
LLQMFGLPYIISPMEAEAQCAFMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET
YFMKDIESELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFREWL
ESPDPAIFGKLDAHIGSNLRKRSSKVRNNDETGSANNLDDSAPDEDVIKGRDDQQSVDNL
SNIKQIFMDKHRNVSKNWHIPSSFPSESVISAYTSPQVDKSTEPFSWGKPDQFVLRKLCW
ERFGWSNQKADELLVPVLKEYSKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGTLA
SELMDDLPQEGSKSTKRRNARTSGTEKNTSEISSSGKKDDAAENEGTAMEKAASKQPSKR
NTGSQFKQSAAGCSELSTTVRRGKGRGRGRGRGRGRGRKKAPSFESSETSTSGGDDGNDE
KEMQDDMTKELSKLRRSARPRKQVEDLAKDLDVDSPSCSSNQSDDNFLGERAVDQEPLSY
QGTVGDTHGPNDRNQGLECPAADDSSRDYLFSGGGFCMADDSGQSNDPIQTFPSPTKASD
EHLNGGRTGSCEPSQSSNDKHLSGNDCPVNIDEAPQEKNPHEGHKDVGSRILPPQITEER
DTALEEATVEAGLIAMPSLRRKRRKT
NT seq 4581 nt   +upstreamnt  +downstreamnt
atgggtgttcagggcctgtgggaactccttgcccctgtcggccgtcgtgtctctgttgaa
accctcgctggcaaaaggctcgccattgatgcgagcatttggatggttcaattcatgaag
gcgatgcgggacgagaaaggggagatggtgaggaacgctcatctccttggcttcttccgc
cgcatctgcaagctcctcttcctccgcaccaagcccgtctttgtctttgatggtggcacc
cctgctctcaagcgccgcaccgttgtggcccgccgccgccagcgcgacaacgctcaggcc
aagatacgcaagaccgccgagaaattgcttctcaatcacctcaaggcacgaaaacttgaa
gaattggcgaaggatatccagattagaaaggagaaggatagttccaagggaaaacaggtt
ttaccggattatgatgatttgaaggagaacaatcctgaaagaaatgagacagataacaga
acatacaatcaggaatcccttgatcaattgctggcggcatcccttgctgcagaggagaat
gggaatttcactggcaacgcttcgacctcaatgcttggtaatcctcctgaagaggaagat
gatggtgatgagaatgaggagatgatatttccagtaatgcccgggaaagttgatccaact
gttttggctgcgttacctccatctatgcaattggatcttctagtccagatgagggagcaa
ttgatggcagaaaacaggcagaagtaccagaaagttaagaaggctccttcaaaattttct
gagctacaaatacaagcttatctcaaaacggttgctttccgtcgagagatagatgaagtg
caaaaatctgctgctggaagggaagtaggcggcatgcaagcttcacgcatagcttccgaa
cccaatcgtgaattcatattttcatcatcatttactggtgataaacgaatattaacgtct
gcgggagtggaggaaaatagagatgcagagcatcagacattggggaaggaacctgcccat
tcagcttctgtggatagtatttcctctacttctcagattcattctgtcgcagttgctgat
gttgatgaacctacaaggggtttcaatcctgacgtagagacctacattgatgaaagggga
cgcattcgagttagcagattaagaggactggggattcgtatgactcgggatttacaacgt
aacttagatttaatgaaagagtttgaacaggagaagcaaaaggaaaattcttgggcatat
gcagaggcaataggccgcagtaacatacttggtgcatcgaaagttcttcctgaaaacaac
catgctcctgaagctttgattggtgatgaagcaaatgatgaaaccgttaacttaattggg
agaacagatggaccattaattcaagaaggtgagaatcatcattctcatgagcagtccaca
catggcggaaaaacttccatagagatttccttcttcgaaggtgacaatgggcccagtggt
acggatgtcgatgatctatttgcacgtttggtgactggaagttcaaagttctcttcagaa
agtgttccttctggcaaatattcttgtgatatttcatctgattctgccttggcggaaggg
gtgcttgatgaaggaagcttcagaaacgatgtggaggaaaggcaaccatctttgttggat
gacagtaattgtgatgagggtgaagtggactgggaggaaggtgtttgccaagttcctacg
aatgtttctaccagcccaactgaacatcaaaaagctttttcaagaggctttttggaagaa
gaagctgaggttcaggaagctataaggagaagtctcgaagatattaggaaggagaagtct
atccttctatcttctggaaggaaagatgtagaaaattacaaagatgttcattctcctaat
attccatttgaaaatggtattgtacgaagtcagaaatcacacgagacagtcgaaagattt
ggaaggctggagaatggggaccaaagggatatcttacagataaacgattctccggacaag
caattagcctcatctataaagctgggagttagaactgatggaaagtctgtggagatggac
aaagatggtcaaatttataaggcttgtaatgatggagtctgcaaagataggagtgattgc
atagaaacaccatattcagatctagttactctggaaccaatggaggctcccataactgga
caggagcaatgcttgtataatcccaatgaaggcaaaagcatacctagtttcacagactgc
acagatggttcttctaaggttatttctcatattcctgagccagtggaaagtgatttaact
gatgttattctagcagataccaaccaaaatgatttgcaagcttcccattcacgccattct
tttgaaataggaaatgactattctgattttcaggagggttcctctacagagaaaatggca
actgagaatgacagagagcgagaacctatatcgggaaaaattgatagcattcttcctgat
gagggagacaagaatatacataacctaaacttggagtttcaagcagaagcatcagaaact
agtttggatgaggaaatgctgcttctacagcaagaacgtatggatctaggagatgagcag
agaaagcttgaacgcaatgctgagtctgtaagcagtgaaatgtttgcagaatgtcaggaa
ttgctccagatgtttggtttaccatatatcatttcacctatggaggcagaagctcagtgt
gcattcatggaactgacgaacctagtcgatggtgttgtaactgatgactcggatgttttc
ttgtttggggctcgaagtgtttataagaatatattcgacgatcgcaaatatgttgagaca
tacttcatgaaggacatagaaagtgagcttggattgaccagagaaaaattgatccgcatg
gcactccttcttggcagtgactatactgaaggcgtcagtgggatcggcatagttaatgct
attgaagtcgtccatgcatttccagaagaagatggtctccagaaattcagggaatggctt
gaatctccagatccagccatttttggaaagcttgatgctcatattggaagtaatttacgg
aaaaggtcgtcgaaagtaaggaacaatgatgagactggctcagcaaacaatttagatgat
tctgcacccgacgaggatgtcatcaaaggtcgtgatgatcaacaatcagtggataacctg
tcaaatataaaacagatcttcatggataagcatagaaatgtgagcaaaaactggcatatt
ccttcatcttttccgagtgagtcagtcatttctgcatacacttctccacaagtggataag
tcgactgagcctttctcatggggaaaaccagatcagtttgtgcttcgcaaattgtgttgg
gaaaggtttgggtggagtaaccagaaggcggatgaactgctcgtacctgttttaaaggaa
tacagcaaacatgagactcaactccggttggaagcattttacacattcaatgagagattt
gcaaaaatccgtagcaagagaattaaaaaagctgtgaaaggtattactggcaccctggca
tcagagttgatggatgatcttccacaagaaggttctaaatctacaaagagaagaaatgca
agaacctctggaactgagaaaaacacatctgaaatatcttccagtggaaagaaagatgat
gctgctgaaaatgagggcaccgctatggaaaaggcagcttcaaagcagccatcgaaacgg
aatactggtagccaatttaaacagtcagcagcaggatgttcggaactgagcacaacagtg
agaagggggaagggaagagggagaggccgaggaagaggaagagggcgaggaagaaaaaaa
gcccctagctttgaatcaagtgaaaccagcactagtggcggagatgatgggaatgacgag
aaggagatgcaggacgacatgacaaaagagttgtccaaactgcgccggtcagcacggcca
cggaagcaggtagaagatttagcaaaagatttggatgttgatagcccaagctgttcatca
aaccaaagcgatgataacttcttaggtgaaagagcagtggatcaagagcctctctcttat
cagggcacagttggagatacacatggtcccaatgacaggaaccaaggccttgaatgtcca
gccgcggatgactcctccagagactatctttttagtggaggtggattctgcatggccgat
gatagcggccaaagtaacgaccccattcagacattcccgagcccaacaaaagcttccgat
gaacacttaaatggagggaggacaggttcttgtgaacccagtcagagttcaaatgataag
catttatcaggtaatgactgtccggtgaacatagatgaagctccacaggagaagaatcca
catgaggggcacaaagatgtaggcagtagaatcttgcccccacagataactgaggaaaga
gatactgctttggaagaagcaacagtcgaagcaggtttaattgctatgccatcattgaga
agaaaaaggaggaagacttga

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