KEGG   Methanosarcina siciliae C2J: MSSAC_0088
Entry
MSSAC_0088        CDS       T03863                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
msj  Methanosarcina siciliae C2J
Pathway
msj03030  DNA replication
msj03410  Base excision repair
msj03420  Nucleotide excision repair
msj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSSAC_0088
   03410 Base excision repair
    MSSAC_0088
   03420 Nucleotide excision repair
    MSSAC_0088
   03430 Mismatch repair
    MSSAC_0088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msj03032]
    MSSAC_0088
   03400 DNA repair and recombination proteins [BR:msj03400]
    MSSAC_0088
DNA replication proteins [BR:msj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSSAC_0088
DNA repair and recombination proteins [BR:msj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSSAC_0088
   MMR (mismatch excision repair)
    Other MMR factors
     MSSAC_0088
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSSAC_0088
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AKB34678
UniProt: A0A0E3PK04
LinkDB
Position
complement(113769..114506)
AA seq 245 aa
MFKAAINAELLKDAIASLAVIVDEVRFKIKPEGISVKAVDPANVAMGIFELGSSAFEEYS
ADECEIGLDLNKITDLLGIADRNDTVRMELEEESNKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSGDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGRDFPILIDFEIANGAGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttcaaggcagcaattaatgcagagcttctgaaagacgcgattgcctcactggctgta
attgtagatgaggttaggttcaaaattaaacccgaagggatttcggtaaaagcagttgac
cctgccaacgttgcaatgggaatttttgaacttgggtcatcggcttttgaggaatacagc
gctgatgagtgtgagataggacttgacctgaacaagattaccgaccttctgggaattgca
gacaggaacgatacagtcaggatggaacttgaagaagaaagcaataaactcctgatcgat
gtaggagggctgtcctatactctttccctgctggacccttcaacaatccgtgcggaaccc
agagttccccagctcgagctgcctgccaaagttgtcctgaacggtgcagaccttaggcgt
gccgtaaaagccgcagaaaagataagcgaccatatgctcatgggggtctccggagatact
ttctatatggaagctaagggcgatacagatcaggtccgcctggaaatgggcagagaccag
ttaatcgacctgaaagcaggtgaagcctgttccctcttctccctagactacctgacagat
atagtcaagcccacaaacaaggtaaatgaggttactctctctcttggcagggatttccct
atcctgattgactttgaaattgcaaacggtgcaggtagaatatcttaccttctggcccct
agaatagaatcagactaa

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