Methanosarcina siciliae C2J: MSSAC_0089
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Entry
MSSAC_0089 CDS
T03863
Name
(GenBank) Transcription factor S
KO
K03057
transcription factor S
Organism
msj
Methanosarcina siciliae C2J
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msj03021
]
MSSAC_0089
Transcription machinery [BR:
msj03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
MSSAC_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Zn_Ribbon_TF
Zn_ribbon_3
Cas12f1-like_TNB
Zn_ribbon_IS1595
CPxCG_zf
FdhE_central
Zn_ribbon_6
TackOD1
Ogr_Delta
FYVE
Ribosomal_S27e
DUF7568
GpA_ATPase
zf-Mss51
Zn_ribbon_Nudix
NANM
DUF2752
Zn_ribbon_PADR1
EDR4-like_1st
DUF5817
GFA
Zn_ribbon_15
DUF7685
HypA
Zn_ribbon_Brz
Baculo_LEF5_C
DUF5830
Motif
Other DBs
NCBI-ProteinID:
AKB34679
UniProt:
A0A0E3PJ50
LinkDB
All DBs
Position
complement(114817..115131)
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AA seq
104 aa
AA seq
DB search
MQFCPKCKSMMFPKDGNYHCRKCGNIIPIESDAENFVSKAKIDDHEVVVLEGEQTSGLPT
TNVKCPECGNNTAAWWLRQLRSADESETRFFKCTKCGFTWREYD
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctgtcccaaatgtaaaagtatgatgtttcctaaagacggcaactaccattgc
aggaagtgtggaaacataataccgattgaaagtgatgcagagaattttgtctctaaagcc
aagattgatgatcatgaagtagtggtactcgaaggggagcagacgtcaggcctgccaaca
acgaatgtaaaatgcccggagtgcgggaacaacactgcagcctggtggctcagacaactg
agatccgctgacgagtccgaaacccgtttcttcaagtgtacaaagtgcgggtttacgtgg
agagaatacgactga
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