Methanosarcina siciliae C2J: MSSAC_0167
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Entry
MSSAC_0167 CDS
T03863
Name
(GenBank) Helicase, SNF2/RAD54 family
Organism
msj
Methanosarcina siciliae C2J
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKB34757
UniProt:
A0A0E3PJE0
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Position
195595..198858
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AA seq
1087 aa
AA seq
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MIILHAGRVGKQFFLWGESPAENETPPVRRGRKPKKPVAKPYPYDSGVENLSSALELLLG
STGRKKAEEINVWVPTAGWNPIPSSPLVAEIPASKAEPAFAPWTVHAYPLEAEEAVVLLC
ACMGKKVLAPGIISGNDLLWWADALKFAGSLVAGQKYLPGVRGGEGEYRAFWEPVFSGED
AGELAKLAKQMPPAARALAPEASSVPPEMPAAVVARQFIEESLDWIVRSEIGEKELAKGT
RKRKSFDSVHDAWVSALKSSDGLIYGEENELLQLAVRAREWQRPLTVLTTSPFRFCFRLE
EPAAEEEIKETEESEAGKIDTKKGGKGIADIEVPEELWYVRYMLQSYEDPSLLIPVKEAW
KPKKGSPLKRYDVKNIRQFLLSSLGQAAGISAGIASSLESPNPSGYSLDTKEAYRFLTES
AADLSQAGFGLLLPGWWTRKGTKTSLKAQAKVKGKKKLQAGYGLTLDKIVSFDWEIALGD
RALTIRELQSLAKLKAPLVKFRGQWVEVNDAEIRAALEFWKKTPNGEASLREVLKLAVGV
SEKTDGVDVEGLNATGWIEELIRRLKDKTGFEELPAPDGFSGALRPYQFRGYSWLAFLRQ
WGIGACLADDMGLGKTVQTLALIQHDLEQVKDQVKDQVEEKVEEIAKEIAEEQVDGLKAA
KPVLLVCPTSVINNWKKEASRFTPGLSVMVHHGTSRKKEEEFKKEAINHAIVISSYGLLQ
RDLKFLKGVSWAGVILDEAQNIKNPETKQAKAARALEADYRIALTGTPVENNVGDLWSIM
EFLNPGFLGSQAGFKRNFFIPIQAERDQEAASRLKEITGPFILRRLKTDTSIISDLPEKM
EMKTYCTLTKEQASLYAAVLEDIEEAMGEAEEGIRRKGIILSALTRLKQVCNHPAQFLKD
NSAVSGRSGKLARLTEMLDVVLENGEKALVFTQFAEMGKMLKEHLQANFGCEVLFLHGGV
PRKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLTGANHVFHFDRWWNPAVENQATDRA
FRIGQTKNVEVHKFICAGTLEERIDEIIERKVQVAENVVGTGEGWLTELSNEELKDILAL
REEAVGE
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgataattttgcatgcaggaagagtcggaaaacagttcttcttatggggtgaaagcccg
gctgaaaatgaaactccgcctgtccggcgcgggagaaagcctaagaagccggttgcaaaa
ccttacccttacgattcaggcgttgaaaacctgtcttctgcccttgagctgctgctgggc
agtactggccggaaaaaggcagaggaaatcaatgtctgggtccctacagcaggctggaat
ccaatcccttccagtcctctcgttgctgaaattcctgcttcgaaagcagaacctgccttt
gctccctggactgttcatgcatatcccctggaagctgaagaagctgttgttctcctctgt
gcctgtatgggaaaaaaggttcttgctcccggcataatctcgggaaatgaccttctctgg
tgggcggatgccctgaaatttgcaggctcgctggtagcaggccagaaatacctgcctggc
gtcaggggcggggaaggagagtacagggctttctgggaacccgtattttccggagaagat
gcgggagagctggcaaaacttgcaaagcaaatgcctccggctgccagggctcttgctcct
gaagcctcttccgtgccgccggaaatgcctgctgctgtagtggcaaggcagtttatcgaa
gagtctcttgactggatagtccgatccgagataggggaaaaagagcttgcaaaagggacg
cgcaaaagaaaatcctttgatagcgtccatgatgcctgggtttctgctcttaaaagctct
gacgggctgatctacggagaagaaaatgaactcctgcagcttgcggttcgagcccgtgaa
tggcagcgcccccttactgtacttacaacttctcccttcaggttctgtttccggcttgaa
gaaccggctgcagaagaagaaatcaaagaaaccgaagaatccgaagccggaaaaattgat
actaaaaaaggtgggaaagggatagctgacatagaagttcctgaagaactctggtatgtc
cgctacatgcttcagtcctatgaagatccgagccttcttattcctgtaaaagaggcgtgg
aagccaaaaaagggcagcccgttgaaacgatatgatgtgaaaaacattcgccaatttctg
ttatcttccctcgggcaggctgccggcatcagtgcaggaattgcttccagtcttgaatct
cccaacccatctggatattcccttgatacgaaagaagcttaccgtttcctgacagaaagt
gcagcggatttaagccaggcgggtttcgggctgcttcttcccggttggtggactcgtaaa
ggtacaaaaactagtttaaaagcccaggctaaggttaagggcaaaaagaagttacaggcc
ggatacgggctaaccctcgataaaatcgtcagctttgactgggaaatcgcccttggagat
cgtgcactcacgatcagggaactgcagtctcttgcaaagctcaaagctccgcttgtgaag
ttccgcggacaatgggtcgaggtaaacgatgcggaaatccgggctgcccttgagttctgg
aagaaaacccccaacggggaagcaagtctgcgtgaagttttaaaactggcagtgggagtt
tccgaaaaaaccgatggtgtggacgttgaagggctcaatgctaccggctggatagaagaa
ttaatccgtcgcctgaaggacaaaaccggatttgaagaactcccggctcctgacggtttt
tcaggtgccctccggccctaccagttcagaggttactcctggctggctttcctgaggcag
tggggcataggggcctgccttgcagacgacatggggcttggtaaaaccgtccagaccctt
gctcttatccagcacgacctggaacaggttaaagatcaggttaaagatcaggttgaagaa
aaagttgaagaaattgctaaagaaattgctgaagaacaagttgacggacttaaagctgca
aaaccggttcttctggtctgcccgacttctgtcatcaacaactggaaaaaagaggcatcc
cgctttaccccgggactttcggtaatggtccaccacgggaccagccggaaaaaagaagaa
gaattcaaaaaggaagccataaatcatgctattgttatctcaagctacgggcttttgcag
cgggatcttaagtttttaaaaggggtctcctgggccggagtgatacttgatgaagcccag
aatatcaaaaacccggaaactaaacaggcaaaagccgcccgggctcttgaagctgattac
cgcatagctcttacggggactccggttgaaaacaacgtgggggatctctggtccataatg
gaatttttaaatcccggcttccttggcagccaggcaggtttcaagcggaatttctttatt
cccattcaggccgaaagggatcaggaagctgcaagtaggttaaaagaaattacaggtccc
tttatcctgcgccgtctgaagaccgatacttcgattatctccgacctgccggaaaaaatg
gaaatgaagacctattgtacgctgacaaaagaacaggcctccctctatgctgctgtcctc
gaagacatcgaagaggcgatgggagaggctgaagaaggcatccggagaaaaggtataatc
ctgtctgcccttacaaggctcaagcaggtctgcaaccacccggctcagtttttgaaggat
aactccgctgtatccggaaggtcaggaaaacttgcaaggcttaccgaaatgctggacgta
gtcctggaaaacggggaaaaagcccttgttttcacccagtttgctgagatgggaaaaatg
ctaaaagaacacctgcaggcaaactttggctgtgaagtccttttcctgcacgggggagtc
cccagaaagcagagggatcggatgcttgagcgcttccaggagggaaaagaatacctccct
atctttgtcctctcccttaaagccggaggcacggggcttaaccttacaggagcaaaccac
gtttttcacttcgatcgctggtggaatccggctgttgaaaaccaggctacggacagagcg
ttccgtataggccagacgaaaaacgttgaggtgcataagttcatctgtgcgggcacgctt
gaagaaagaatcgacgagattatcgagcgcaaagttcaggtcgcagagaacgttgtcggg
accggggaaggttggctgacggaactttccaatgaggaactgaaggatattcttgctctt
cgagaagaggcggtaggtgaataa
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