Methanosarcina siciliae C2J: MSSAC_0271
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Entry
MSSAC_0271 CDS
T03863
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
msj
Methanosarcina siciliae C2J
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msj03000
]
MSSAC_0271
Transcription factors [BR:
msj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSSAC_0271
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrmB
TrmB_EBD_N
HTH_IclR
HTH_34
HTH_27
DnaD_N
HTH_46
GntR
PadR
ULD
YgaB
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AKB34861
UniProt:
A0A0E3LC41
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Position
326080..326853
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AA seq
257 aa
AA seq
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MFSPLNPQLIRNLEKLGLTENEAKAYVGVVSLREATAREVHELTNVPRAKIYDVLKVLAK
KGYLEIRQGSPTYFRAVDPKQVIGKIKDEFINCAIETLDQLNELSYELPRTSPVWCIQSE
WGIKNRIREILIGVKEELIVFSSSTEFFREFEAELKRLEKNCRLTLIVNDLERFKSLPFE
FREPTKEFSDSINNIVIDGVKYDEQFFMIADGKESIGVHSAGNKREAVVIKLPVVCYMQK
MIYDRVLEPNFIGKDLP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgccacttaatcctcagttaattcgcaatctggagaagttagggctgactgaa
aacgaggcgaaagcctatgtcggggttgtcagtctgagggaggctacagcccgggaagtc
catgaacttacgaatgtgccgagagccaaaatatatgatgtcctcaaagtgctggcaaag
aagggctatctggaaatccgccagggttctccaacctatttccgggctgttgatcccaaa
caggtaataggcaagataaaagacgaattcatcaactgtgcgatagaaacgcttgaccag
ctcaacgagttaagttacgaacttcctagaacttctcctgtctggtgtatccagagtgag
tggggaattaaaaacagaatccgggaaattctcatcggggtaaaggaagaactgattgtt
ttttcttccagtacggagttcttccgggaatttgaggctgaactcaaaagattggaaaaa
aactgccgtttaaccctcattgtgaatgatcttgagagattcaaatccctgccctttgag
ttcagagagcctacaaaagagttttcggactccataaataatattgttattgatggagtt
aagtatgatgaacagttctttatgattgcagacggaaaggaatcaattggagtccacagt
gcgggaaacaaaagggaagcagtcgtaatcaagctcccggttgtttgttacatgcagaag
atgatctacgacagagtgcttgagccgaattttattggaaaggatcttccttaa
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