Methanosarcina siciliae C2J: MSSAC_1080
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Entry
MSSAC_1080 CDS
T03863
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSSAC_1080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msj03021
]
MSSAC_1080
Enzymes [BR:
msj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSSAC_1080
Transcription machinery [BR:
msj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSSAC_1080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CBP66
DUF1947
Motif
Other DBs
NCBI-ProteinID:
AKB35670
UniProt:
A0A0E3PKI4
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All DBs
Position
1311580..1312779
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AA seq
399 aa
AA seq
DB search
MSISEATIDSMIKDLPFPFNILNTLREDVLKAGVSKKEMEEIIEKMMEEYTASCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKE
HPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDQVKE
KFNEELNVLVNISPDIDNQIVITPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEGE
EYTLYTEGSALREVLQFNGVDKTRTSTNNINEIYEVLGIEAARNAIIKEATDTLREQGLT
VDIRHIMLVADLMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQ
GVTENIIVGQPIRMGTGDVHLVSRRVEKVEAEELEAEEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagtgaagctacaatagacagcatgataaaggacctgccatttccttttaac
atattgaacaccctgagggaagatgttctcaaagccggggtgagcaagaaggaaatggaa
gagatcatagaaaaaatgatggaagaatatactgcttcatgcatagagccctgtgacgct
gcgggcgtcgttgcagctcaatccataggggaaccgggtacccagatgacgatgcgtacc
ttccactacgccggtgtggccgagattaacgttaccctcggtcttccccgccttatcgaa
atcgtggatgcgaggaaaatcccgagcactcctatgatgacaattgccctttccaaagag
catcctgaagattacgcttacgacagagagaagacaagagctctcgcctgggagattgag
gcaaccaagatcgaccacatcgctgacgtgaccactgacctctcccagatgaagcttata
atagacctgcacgaaaaggcaatggaaggcaggaatattactatagaccaggtgaaggag
aagttcaacgaagagctgaacgtactggtcaacatttccccggatattgataaccagatc
gtcatcacccccggagagccctcttacagagaactgctccagcttgcaaaaagcatccac
aatgtaacccttaaaggcatagaaggaatcaagagagtggtggtcaggaaggagggtgaa
gagtataccctctatacggaaggctcagctctgcgggaagttttgcagttcaatggtgtg
gacaagaccagaaccagcacaaacaacatcaatgaaatctacgaagtgcttggaatcgaa
gctgcaagaaatgccattatcaaggaagcaacggataccctgcgtgaacagggtctgact
gtggacatcaggcacataatgcttgtggcagacctcatgacctgtgacggagaagtaaag
cagatcggtaggcatggaatttcaggtgaaaaggccagtgtatttgcccgtgcagctttc
gaagttactgtcaaccacctcctggacgcaggtatgcgcggagatgtggatcagcttcag
ggtgttacggaaaacatcattgtcggtcagcctattcgcatgggtacgggtgatgtgcac
ctggtcagcagaagagttgaaaaagttgaagctgaagagcttgaagcagaagaagaataa
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