Methanosarcina siciliae C2J: MSSAC_1086
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Entry
MSSAC_1086 CDS
T03863
Name
(GenBank) Translation elongation factor 1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSSAC_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msj03019
]
MSSAC_1086
03016 Transfer RNA biogenesis [BR:
msj03016
]
MSSAC_1086
03012 Translation factors [BR:
msj03012
]
MSSAC_1086
04131 Membrane trafficking [BR:
msj04131
]
MSSAC_1086
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msj04147
]
MSSAC_1086
Messenger RNA biogenesis [BR:
msj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MSSAC_1086
Transfer RNA biogenesis [BR:
msj03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MSSAC_1086
Translation factors [BR:
msj03012
]
Eukaryotic type
Elongation factors
MSSAC_1086
Membrane trafficking [BR:
msj04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MSSAC_1086
Exosome [BR:
msj04147
]
Exosomal proteins
Proteins found in most exosomes
MSSAC_1086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AKB35676
UniProt:
A0A0E3LCK4
LinkDB
All DBs
Position
1317471..1318739
Genome browser
AA seq
422 aa
AA seq
DB search
MAADKPHMNLAVIGHIDHGKSTLVGRLMYEAGAVPAHIIEKYKEEAKQKGKESFAFAWVM
DSLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPD
GVMAQTKEHIFLSRTLGISQLIIAINKMDAVDYSEAKYKEVVEQVSGLLKMIGFKPADIP
FIPTSAFMGDNITKLSEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIGT
VPVGRVETGVMKKGDKVVFMPGGAGGEVKSIEMHHEEIPQAYPGDNIGWNVRGIGKNDVR
RGDVCGHTDNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPK
TGQVKEENPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVK
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacaaaccgcacatgaatttagcagtgatcggtcacattgaccacggaaag
tcaacccttgtaggacgcttaatgtacgaagccggagcagtaccggctcacattatcgag
aaatataaagaagaagcaaagcagaagggtaaggaatccttcgcttttgcatgggttatg
gactcccttaaggaagagcgtgaaagaggtatcacaattgacatcgctcacaagagattt
gacacacccaaatattactttacagtcgttgactgtccgggccaccgtgacttcgtcaag
aacatgatcacaggagcttcacaggcagacgcagcaatcctcgtcgttgcagcccctgac
ggtgtcatggcccagaccaaggaacatatcttcctttcaaggaccctcggtatcagccag
ctgatcatcgcaatcaacaagatggacgcagtcgattacagcgaagcaaagtacaaggaa
gttgtagaacaggtatccggcctccttaagatgatcgggttcaagccagccgatatcccc
tttattcctacctctgcatttatgggagacaacatcaccaagctcagtgaaaagactccc
tggtacaagggtcccgtaatcatgcaggctctcgatgaactcaaggaaccggaaaaacca
tccactctccctctcaggatccctgtcgaagacgcatacaccatctcaggtatcggaact
gtccctgtaggcagagttgaaaccggtgtaatgaagaagggtgacaaagtagtcttcatg
cccggcggagccggcggtgaagttaagtccattgaaatgcaccacgaagaaattccacag
gcctaccccggagacaacatcgggtggaacgtccgcggtatcggcaagaacgacgtccgc
agaggtgacgtctgtggccatactgacaacccgccaaaggttgctgacgaattcgtaggg
cagattgtggttctccagcacccctccgcaatcactgcagggtacacacctgtcttccac
gctcacacctcccagatcgcatgccagctgatcgagcttaacaagaagctggacccgaag
accgggcaggttaaggaagaaaacccgaccttcattaaggccggagatgcagcaattgta
accatcaaaccgacaaaaccgatggttatcgagcccgtaaaagaaattccacagctcggc
agatttgctatccgtgatatgggtatgacaattgccgcaggcatgtgcatgagtgttaag
cagaaataa
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