Methanosarcina siciliae C2J: MSSAC_1253
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Entry
MSSAC_1253 CDS
T03863
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
msj
Methanosarcina siciliae C2J
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msj03400
]
MSSAC_1253
DNA repair and recombination proteins [BR:
msj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSSAC_1253
Archaeal homologous recombinant proteins
MSSAC_1253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
HemS
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKB35843
UniProt:
A0A0E3PL75
LinkDB
All DBs
Position
1494942..1498166
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLSIENIRSYKKLDFAFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DMIFKGAEDAKINLGFEHLGKEYLIEQAFRYSSKSENASSSKCVLYADGENIVDQATRTY
EEVCALLNMDEEAYRNCAYIRQGEIDVLINAKPKDRQRMIDDLLQLGKLEEYRERAGYAK
TAVRRLERDTKNSFSGVKAEIEGIESTEPVKALNGLKQKVKETDGSLKELNEKKDYAAAR
KGELDLRIAEYRERLQEIEVLKEAIRKTQEDKAGCFKEKEAFSGEVQGQRRVLLELGEEN
AGLREDCGFGDLEIEALLLRQEKEESSAREKVNALSKDLALLLKEEETGSQALCELEKEK
TEAERTLLECRTSIGAANKEIEGYRENIRKLEEESKGLGEKAGFKAGSGAADEIALLIKE
FEEKESLLRDRKNEVSTKLGLTFKEKETCDLNLAELEKELQNSGAAVRKGSTEIEALEKE
LRENSKAVLDIQEQKSEVLAELQGLGFAADQLENLEDFNELLLENKNRLHGTEKELEATL
RELENSLRKNRELLAAGKCPTCGQELKGSEIACTAEECEDKMEKLSSELADIKLQHAELE
KKLTRLKDAKKLEKRISDYDIEIEKLQEKAKASGKLIETHRARIEEDSLKLENLDKRKQE
LESSGTQLLSDIKALQAKEAEAQKAHNEGENALREAKALDRKFAENTAEIEALNGKIRTS
LALIENYGERLGELNDKLKALAEKENLSKEKLKALELALEAARKMENEAKIAHAESEKLL
VQAKKLQVNLLRIENIKHKISELEAAIRNLAEKVGFFDREILERSERVRQMGEKLEGNRL
SELQQKRAQFEQAQAKITENIREKTEEKDTLLKEIGMLENSLKRLRELKEEFKSLENRQL
YLEAVYSNAEELEDTYLRVRADMRARNIGALSVLLNEMFAFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLALGFGGDKADGLPPMILDEPTVFLDR
GHIRQLLKLIDMMRSIGVGQIIVVSHDDSLIDSADHVFQVEKDPLTNMSSITRL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgaaaaacctgtccatagaaaacatccggagctacaaaaagctggacttcgct
ttcgaagacggagtgacagtcatttccggggtaaacgggagcgggaaatcaagcctgctc
gaagcctgctttatggggcttttcgggagcaagatcctctcaaaggactttgtgcttgca
gatatgatcttcaaaggagctgaggatgcaaaaatcaacctgggcttcgaacatctcggg
aaggagtatcttattgagcaggctttcaggtactcttcaaaaagtgaaaacgcttccagt
tcaaaatgtgtgctctatgctgacggagaaaatattgttgaccaggcaacccgcacctat
gaagaggtctgtgccctcctgaacatggatgaagaggcataccggaactgcgcctacatc
cggcagggggaaattgacgtgcttatcaatgcaaagccaaaggacaggcagcgcatgatc
gacgacctgctccagctcggaaagcttgaggaatatcgcgaaagggcagggtatgcaaag
acagctgtccgaaggcttgaaagggacacaaaaaatagcttttcgggtgtgaaagccgaa
atcgaagggattgagagtacggagccagttaaagccctaaacggactcaagcaaaaggtg
aaagaaactgatggctcattaaaagaacttaacgagaaaaaagattatgctgctgcccgt
aaaggagaacttgacctcaggattgccgagtacagggaacgcctgcaggaaattgaggtt
ttgaaagaggctatccggaagactcaggaagataaagccggctgttttaaggaaaaagaa
gctttttccggagaagtccagggtcagaggcgcgttttgcttgaacttggggaagaaaac
gccggtttaagagaagattgcggttttggagaccttgaaattgaagcccttttgttgcgg
caggaaaaagaggagtcttctgccagggaaaaggtaaatgccttatcaaaggatcttgct
ctcctcctgaaagaagaagaaacaggttcacaggccttatgcgagcttgaaaaagaaaaa
actgaagctgagcgcaccctgcttgagtgcaggaccagcatcggggctgcaaataaggaa
attgaagggtacagggaaaacataaggaagcttgaagaggagagcaaagggctcggagaa
aaagcaggttttaaagcaggctcaggcgccgcggatgaaattgccctgttgataaaggaa
tttgaagaaaaggaaagccttctcagggaccggaaaaacgaggtatcaacaaaactcggg
cttacctttaaggaaaaagaaacctgtgacctgaaccttgccgagctcgaaaaggagctt
caaaactccggggctgcagtccggaaaggaagcacggaaatcgaggctcttgaaaaagaa
ctcagggagaactcaaaagctgtactggatatccaggagcagaagtccgaggttttggca
gagcttcagggacttggttttgccgcagaccagctcgaaaaccttgaagatttcaacgag
ctcctgctggaaaacaaaaacaggcttcatggaacagaaaaagagcttgaggctactcta
agggaacttgaaaacagcctccgtaaaaaccgggagctgcttgctgcggggaagtgcccc
acctgcgggcaggaactcaaagggtcagaaattgcctgtacagccgaggaatgcgaagat
aaaatggaaaaacttagctccgaacttgcggacataaaactccagcacgcggagcttgag
aaaaaactcacccggctcaaggatgcaaagaagctggaaaagcgaatttcggattatgat
attgaaattgaaaaacttcaggagaaggcaaaagcttccggcaaactgattgagacacac
agggcccggatagaggaagactccctcaaacttgagaaccttgataagcgaaaacaggaa
cttgaaagctcagggactcagctcctttcggacattaaagccctgcaggccaaggaagcc
gaagctcaaaaagctcataatgaaggcgaaaatgccctccgtgaggcaaaagctcttgac
aggaagtttgccgaaaacaccgccgaaatcgaagccctgaacggaaaaatccggacttcc
cttgcccttatcgaaaattatggagagagacttggggagctaaatgataagttaaaggca
cttgcagaaaaggaaaacctctcaaaagaaaaactcaaggctcttgaacttgccctcgaa
gctgcgcggaaaatggaaaatgaggccaaaatagcccacgctgaaagtgaaaaactcctg
gtacaggccaaaaagctccaggttaacctgctccgcatagaaaacatcaaacataaaatc
tccgaacttgaggctgctataaggaaccttgcagaaaaagtgggtttctttgaccgtgaa
atccttgaacgcagtgagagggtaaggcagatgggagaaaaactggaaggaaacaggctt
tccgaactccagcagaagcgagcccagtttgaacaggcgcaggcaaaaatcaccgagaac
atccgggaaaaaaccgaagaaaaagacaccctgctcaaagaaatcggcatgcttgaaaat
agcttgaaacgcctcagggaactcaaagaggaattcaagtctcttgaaaacaggcagctc
taccttgaagccgtctacagcaatgccgaagagcttgaagatacctatctgcgcgtccgg
gcagatatgcgggcaaggaacataggcgccctttccgtcctcttaaatgagatgtttgct
ttcatgtacacaaacaacgcttactcccatatcgagcttgaccccgaatacaacctgacc
gtctacagaaaagacggcacacctcttgaacccaaactcctcagcggaggcgagcgtgca
atcttcaaccttgtcctgcgctgtgccatctacaggctccttgccctgggctttggcgga
gataaagccgatgggctccctcccatgatccttgacgaacccaccgtttttcttgaccgc
gggcacatcaggcagctcttgaaactcatagacatgatgcgcagcatcggagtcggccag
atcatagtggtctcccacgacgactccctcatcgattccgcagaccacgtcttccaggta
gaaaaagaccctcttaccaacatgtcctcaattacaaggctgtaa
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