Methanosarcina siciliae C2J: MSSAC_1726
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Entry
MSSAC_1726 CDS
T03863
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
Organism
msj
Methanosarcina siciliae C2J
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
AAA_15
AAA_23
SMC_N
GAS
ANC1_spectrin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKB36316
UniProt:
A0A0E3LCY2
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Position
complement(2084890..2088765)
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AA seq
1291 aa
AA seq
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MKIDAIHIDGFGKFSRLSVEDLPSGMVILTGANEAGKSTLFTFIRRMFFGIPNTRCNLYP
PLEGGQHGGRLVVIDSEEERWVIERNTSRKDDVKVVLPDGNTGSKTELLKLLGHADRNVF
ENIYAFGLEELQSFETLNDRSINSKLYSAGTGVGVSIPELVKSINNMESDLYKPRGRKPL
INELLRKIRKNSEEIAEFEESQKKYDTLHFELEQRTLEIDQLKEKSRNIRKKLNHIQNLL
SVWDDWRALQESKTDLGTLPGLGSFPEKGEEKLERLLKKIEEIRENISRLEQELDKNAVN
ERSLSPDESLLGQKDAVLELESELGKYRSEVKTLPTLEAKLKQEEAGLSELLLELGPDWD
EEALDRFDRSIPARENVIRMRRAVEEIEAKIKETQNELNQVLTGIERVLQEKDVFEESLL
VHRDQVIELGNGIEKYRADKDSLLSETREVRARKAELEENLSGFGKGWDETTLARFERST
PSKETVPGKRREMGEAEKTIERYRDRLELALGEIEEVRGEVEALEEKLLAYSKLPDPEEV
KQGLEAVSYLRVKQPLLREKESELKNLEKDLEKEEMLFAVFRPRETEHEEGLPLWPAGML
LLAGGIGLAYEYMNDALLPGLGIFFLLFATSAIYFLKARKKPSSQPSSPPAGEEHLKGTE
ARKQKAQDSKEKLSGEIAVLKADMKNRARKCGFEDIPDPSIREQKADELQRVLLDLKTAG
ELRQGKDKLRKKLDKLDAAYKEIEGKLKAGEERQEEVRQEWKEWLLSSGLDPELSPEHVL
DLLSAIKACLEKQKNIKELEKQVKFREAAVKKYEEEALGVLEACERPVSGIAFDSEIAKL
REDVSFAFNQAERMRTLELESESLEHKKEDLEARLLEERTQRDALSEKWTGWLGTYGLDP
SLSVESVLEIFSIIGRCFDRQRAIRNLEEQIVSGKTSIEAYEVKVSGVLQECERPFSGLS
FDTQVEKLRSDLEEASEEARKLDQLKTRSKELEIELQAAREKSEAAEEELAALLESGSAA
TEEKFRENARHWAQRTELENRVREAEQQIRRVSGDGEKYELFVEELQASDPLGLEEENRR
LEECLETLEQETSENMDRRGAIGNQIEQLEHGSEGSLARVMQESLLEDLHEKSRKWASLV
LAQKVLARAIEVYEKERQPAVIVEAQSFFSKITGGRYTRIYSPLNSSEIYVEDRKGRQKS
VQELSRGTAEQLYLSLRFGFIREFGRHSESLPIVFDDVLVNFDPERCKCTCEAIKDLVPG
NQLFYFTCHPETVEMLAGRFPEARVVDLDAV
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgatgccattcatatcgacggatttggcaagttttccaggttatcggtggaa
gacctgccttccggcatggtcatattaacaggagcaaatgaggcaggaaaatcaacatta
ttcacttttatccggaggatgttttttggcatccccaacacaaggtgcaacctctatccc
ccacttgaaggagggcagcatgggggaagacttgttgtaatcgattccgaagaggagcgc
tgggtcatagaaaggaacacaagccgaaaagacgatgtaaaagtcgtgcttcccgatggg
aataccgggagcaaaactgaacttcttaaactcctgggccatgcagacaggaacgttttt
gaaaacatctatgctttcggccttgaagagctgcagagttttgagaccctgaacgaccgg
agcatcaacagcaaactctacagtgcaggcacaggggtcggagtttccattccggaactt
gtgaagtccatcaacaacatggaaagcgacctgtataaacccaggggcaggaaacccctt
attaatgagctactaaggaaaatcaggaagaacagtgaagaaattgccgaatttgaagag
tcccagaaaaaatacgatacccttcatttcgaacttgaacagagaaccctggaaattgat
cagttaaaagaaaagtcccggaacatacggaaaaaattaaaccacatccagaacctgctt
tccgtctgggacgactggagagccctgcaggagtcaaaaactgaccttggaactttgccc
gggcttgggagtttccctgaaaaaggggaagaaaagcttgaaaggctcctgaaaaaaatt
gaggaaataagggagaacatttcaaggcttgagcaggaactggataaaaatgccgttaat
gaacggagcctttctccggacgaaagcctgctcggacaaaaagatgcggtgctcgaactg
gaaagcgagcttgggaagtacaggtccgaagtaaaaacactccctaccctggaagcaaag
ctaaagcaggaagaagcagggctttccgagctcctcctggaactgggtccggactgggat
gaagaggctctggaccgctttgaccgttccatccctgcaagggaaaacgtcatccgaatg
cgaagggcagtagaagaaattgaggctaaaataaaggagactcaaaacgagctcaatcag
gtcctcaccggcatcgagcgggtccttcaggaaaaagacgtctttgaagaaagcctgctg
gtgcacagggaccaggtaatcgaacttggaaacggaatcgagaaataccgggctgataag
gactccctcctttccgaaacccgggaagtccgggccagaaaagccgaactggaggaaaac
ctttcagggtttgggaagggctgggacgaaactactcttgcccgtttcgagcgttcaacc
ccttcaaaggaaaccgtacctggaaagcgaagggaaatgggagaggctgaaaaaacaatc
gagagatatcgcgacaggcttgaacttgcccttggggaaatcgaagaagtccgcggggaa
gtcgaagccctggaagagaaactcttggcatactcaaagcttcccgaccctgaagaggta
aagcaggggcttgaagctgtaagctacctcagggtgaagcagcctctcctcagggaaaag
gaaagtgaactcaaaaacctggaaaaagacctggaaaaagaagagatgctttttgcagtc
ttcaggccccgggaaaccgaacatgaggaagggcttcccctctggcctgcaggaatgctc
ctgcttgcaggtggcataggccttgcctacgagtacatgaacgacgccctgctccccgga
cttggcatatttttcctcctttttgctacttctgccatatacttcctgaaagccaggaaa
aagccgtcgagtcagccttcaagtcctcctgccggggaggagcacctgaaaggaaccgaa
gcccggaaacagaaagcacaggactcaaaggaaaagctgtccggagagattgctgtcctg
aaagcagacatgaaaaaccgggcaagaaagtgcggctttgaagacatccccgatccctcg
atacgggagcagaaagccgatgaactgcagagggttctgcttgatttgaaaactgccggg
gagctgcgccagggaaaagacaagctccggaagaagctggataagttagatgcagcttac
aaggaaattgaaggtaagctgaaagccggagaggaaaggcaggaagaggttcgccaggaa
tggaaagaatggcttctttcttcaggactcgacccggaactttctcccgagcatgtgctt
gacctcctttcagcgatcaaagcctgcctggaaaagcaaaaaaatatcaaagaactggaa
aaacaggtaaagttcagggaagctgctgttaaaaagtacgaagaagaagcccttggcgtt
ctggaagcctgcgaaaggcctgtttcgggaatcgcatttgacagtgaaatagcaaagctc
agggaggacgtaagttttgcatttaaccaggctgaaagaatgaggactcttgaacttgaa
tccgaaagccttgagcacaaaaaagaagatctcgaagcccggctacttgaggaaagaacg
caaagggatgccctttccgaaaagtggaccggctggcttggaacttacgggcttgacccc
tcgctttccgtggaaagcgtgcttgaaatattttcgataatcggaagatgttttgacagg
cagcgggcgatccggaaccttgaagaacagatagtttccggcaaaacttcgatagaagcc
tatgaagtaaaggtgagcggggtcctgcaggaatgcgaacgtccgttttccggactttct
ttcgatacccaggtcgaaaagctccgttcggaccttgaagaggcatccgaggaggcaagg
aaactggaccagctgaaaacaaggtcaaaagaacttgagatcgaacttcaggcagcccgg
gagaagtctgaagctgctgaagaagagcttgcagcccttcttgaatccggttccgcagca
acggaagaaaagtttcgtgaaaacgcacggcactgggctcagcgaactgagctcgaaaac
agggtaagggaagctgagcagcagatcaggagggtttccggggacggggaaaagtatgag
cttttcgtagaagaactgcaagcctccgatcccctgggcctggaagaagaaaaccgcagg
ctggaggagtgcctggaaaccctcgaacaggagacctccgagaacatggacaggcgcgga
gcgataggaaaccagatcgaacagctcgaacacgggagtgaaggttccctggcaagggta
atgcaggaaagcctgcttgaagaccttcacgaaaagtcaaggaaatgggcatccctggtc
cttgcccaaaaagtccttgccagagccatcgaagtctatgaaaaggaaaggcagcccgca
gtcatcgtggaagcccagtcctttttctcaaagatcaccggaggcaggtacacgaggatt
tattccccgctcaactcttccgaaatctacgttgaagaccggaaaggccgccagaagagc
gtccaggaactcagccggggaacagctgaacagctttatctctccctgcgtttcggtttt
atcagggaattcggaaggcactcagaatctcttcccatcgtatttgacgacgtgctggta
aactttgaccccgaacgctgcaaatgcacctgtgaagccataaaggaccttgtcccgggc
aaccagctcttttatttcacctgccaccccgaaaccgtagagatgcttgcaggaaggttc
ccggaagcccgggttgtagaccttgatgcggtataa
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