Methanosarcina siciliae C2J: MSSAC_1981
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Entry
MSSAC_1981 CDS
T03863
Name
(GenBank) cell surface protein
Organism
msj
Methanosarcina siciliae C2J
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_3
DUF3344
PKD_4
PQQ
PQQ_2
PKD
CARDB
MG2
DUF7076
InlK_D3
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
AKB36571
UniProt:
A0A0E3LD33
LinkDB
All DBs
Position
complement(2424204..2429873)
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AA seq
1889 aa
AA seq
DB search
MNEGHDVCSYYVEDNYGEAAVGTTTFATTGLSGITSATLTADYLASNNGNYGFPTADNTF
SYTGGTPPVEGTFTNLELDRVPDVQGAYSGVDSWDVTASVTGTDDTTFAYSRYFSGTGTA
AFYKIPLAFLVVKSPLPAVAPVAGFSADVTTGTAPLTVTFTDESTNDPTEWAWDFGDGGT
NDQQNPVHEYTAAGTYTVTLAATNSAGSDDEVKTDYVTVTAGGNTTGLADAPWPKFQYDL
ANTGQSPYNGPQTNTVLWTSSVGGMNYAGQAIAEDGTIYTGGGSTFYALYPNGTTRWSYG
VGNSIYSTPAIAEDGTIYVGCMDSKVYAFNADGTLKWSYTTGNKLQNSPAIGADGTVYIG
SYDKVFYAINPDGSLKWTYDGATGYYYYSSAAIADDGTIYVGDYKGVLHALYPNGTARWT
SQIGMIFASPIIGEDGTIYLTHGSYLSAVNPDGTVDWSYTVGGYGYGSPAVGSDGTVYVG
SYAGEVFAINANGTQKWSYPLSSSSRFYAAPAIGADGSVYLGSTDSNVYAFNTDGTLKWS
YTTDGAIRNGPTIGDDGTLYIGNQAGTLYAFKDPEVTTQIDLTISGVVNTVPGSAAFARE
PNAVRVMNVKNQGTDTATNISVAVYADDVSSTVPVATTIIESIAAGATTTVTLTDPTIRD
LAGGTVTYSAVVDPDDLIVETDEVNNNKTSSAKSVVYNGYKGKGIYWEGGSNITTKHTFD
LNGNVVYYTQPDSFYRSVDWTDRTETWTAADLPVPSGATIEKAFLYISYNWDQTPAGVPD
MNAVFNGNNLTLGTPYMDWSNFGAYAYYEYGLYPAIDVTSLFNNGGDNTLVMTSNTGNRE
ALYPSTLVVIYSDPAETRKQIFINEECDELAVSASSYGTTLEEATAYAEFSGMTIDTSNV
QSATLHSFAGSAGPNEGNLIFNGVTVATGAWQGTADTASAQSFDVKYYLEATGNEAGIQA
TTSGGMDALQQILVVEYAAGTASVAGFTADPTSGDAPLNVTFTDASIGEITSYAWDFETD
GTVDSYDQNPSHEYTDAGTYTVTLTVTGPGGSDDETRTDYITVTDGSGPGPVGLADTAWP
KYQCDTRNTGQSSVNGPQTNNVLWTAAIGGYIYGSEAIGADGTIYVGSATGNLYALNPDG
TVKWSFTTGGAIYGTPAISADGTIYFGSRDNRIYALNPDGTVKWSYTTGYMVDSSPTIGS
DGTIYIGSLDCKLYALNPDGTVKWTYDTNYKIGSVAPAIGADGTIYVADDWGSFYALNPD
GTLKWSYDLGRRTYRAAIGADSTIYLVGQSDGTMYALNADGTLKWSYKAGVRLFWSPAIA
SDGTIYVGSTWGGNKLFAINPDGTLKWSYTTGGGGVQRSAAIGADGTVYFGSSDGNAYAL
NPNGTLKWKYATGEIVSTPSIGSDGTLYIGNNQGIVYAFKDVAPVANFSADVTSGDAPLN
VTFTDQSTGSPTSWSWDFGDGETSDEQNPTHIYSTPETNYTVTLTVENALGNDTETKIDY
IRVGVVTPAPVADFTAEVTSGDVPLRVQFTDLSTAATGWAWDFDNDGTVDSTAQNPVHTY
GDAGIYSVNLTVINAGGSNSEVKIDYITVSSTPTEPEPVAAFTADVTDGTAPLTVNFTDQ
SAGTPTSWLWDFGDGANSTAQNPVHAYSAAGNYTVNLTVENAAGSDFELKSDYIKVSEIS
GSTVTLYFDPASSSVSENESTEINLVASNFPAGLSGYNLTVVIDDPDVAEIVDIEYPTWA
LITENSTLPGTSIYMKTVDLEDSVQEGAADVVLATLTVSGKEKGSANLSIGVKRLEEDSG
DSIEPALLAGTIEVTLLSPLPDQEYAPKDLDGDGLYEDLTGNGEFSFVDIVAYFHNMDWI
EENMQVEYFDFNGNGRIDFDDVVRMFAMI
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaggggcacgatgtctgctcgtactatgtcgaggataattacggagaggccgca
gtcgggactaccacgtttgccacaaccggtctatcgggtatcacctccgccacactcacc
gccgactacctggcaagcaacaacgggaactatgggttcccgacggcggacaacaccttc
tcctacactggggggactcctcccgtcgagggaacgtttacaaacctcgaacttgaccgc
gtccctgatgttcagggcgcatattccggtgtcgactcctgggacgtgactgcctcggtc
actggcacagatgataccacctttgcatactcgcgatacttttcaggcacaggtaccgca
gcgttctataagatcccgctcgcgttcctcgtcgtgaagagcccgttgccggccgtcgca
ccagtcgccggcttctctgccgacgtaacgaccggtaccgccccgctgaccgtcacgttc
accgatgagtccaccaacgacccgaccgaatgggcctgggacttcggcgacggcggcacc
aacgaccagcagaacccggtccatgaatacactgcggctggaacctacaccgtcaccctg
gccgcgacgaactcggccgggagtgacgatgaggtcaagaccgactacgtcacggtgacc
gctggagggaacaccaccggtctcgcggatgcgccctggccgaagttccagtatgatctt
gccaacaccggccagtcgccctacaacgggccgcagaccaacaccgtcctctggacgtcc
tccgtcggcggcatgaactatgccggccaggcaatcgccgaagacgggaccatctacacc
gggggcggcagcacgttctatgcactgtatcccaacggcaccaccaggtggagttacggc
gtgggcaacagcatctacagtacaccggcaattgcagaagacgggaccatctacgtcggg
tgcatggactccaaggtctatgccttcaacgctgacggcaccctcaagtggagctacacc
accggcaacaaactccagaattcacctgcgatcggtgcagacgggaccgtctacatcggc
agctacgacaaggtgttctacgcgatcaaccccgacggcagcctgaagtggacctacgac
ggcgccaccggctattactactacagctcggcggcaatcgccgacgacggtaccatctac
gtcggcgattacaagggtgtgctgcatgcactgtatccgaacggcaccgcccggtggact
tcccagataggaatgatctttgcctcgcctataatcggtgaagatggaacgatctacctc
acgcatggctcctatctgtccgcggtcaatcccgacggtaccgtggactggtcatacact
gtgggaggatacggttacgggtcgccggctgtagggtccgacggcaccgtctacgtggga
agctacgccggtgaagtctttgcaatcaacgccaacggtacccagaaatggtcatatccg
ctctcatcctcgagcaggttctacgctgcacctgcgatcggtgcagacggcagcgtgtat
ctcggttcgaccgactccaacgtatacgcgttcaacaccgacggtaccctgaaatggagt
tatacaaccgatggagccattcgaaacggtccgacaatcggtgatgacggcacactctac
atcgggaaccaggccggcacactctatgcgttcaaggacccggaagtcaccacacagatc
gacctgacgatctccggggtcgtgaacacggtgccggggagtgcggcctttgcgagggaa
ccgaacgccgtcagggtcatgaatgtgaagaaccaaggtactgataccgccaccaacatt
tcggtcgccgtgtatgccgacgatgtcagcagcacggttccggtcgcgaccacgattata
gaatcgatcgcggccggcgcaacgaccactgtaacgctcaccgacccgaccataagggac
cttgcgggcggcacggttacctactccgcagtcgtcgacccggacgacctgatcgtcgaa
acggacgaggtcaacaacaacaaaaccagttctgcaaagtccgtggtctacaacgggtac
aagggcaagggcatctactgggaaggcggcagcaacatcacgacaaagcataccttcgac
ctgaatggaaacgtcgtgtactacacccagcccgattcgttttaccggtcggtagactgg
accgaccggaccgagacctggacggctgctgacctcccggtcccgtccggtgcaaccatc
gagaaggcattcctctacatcagctacaactgggaccagactcctgccggcgtcccggac
atgaacgcggtcttcaacggcaacaacctgacgctcggcacgccgtacatggactggagc
aacttcggggcctatgcctactacgagtacggtctctacccggcgatcgacgtgaccagc
ctcttcaacaacggcggcgacaacacgctcgtcatgacttcgaacacaggcaacagggag
gcgctgtacccgagcacgctcgtggtgatttactccgacccggccgagacccggaaacag
atcttcatcaacgaggagtgcgacgaacttgccgtctcggcctcaagctacggaaccaca
cttgaggaggcgaccgcgtacgccgagttctcgggcatgaccatcgacacctcaaatgtc
cagagcgcgaccctgcacagctttgccggcagcgcagggcctaatgaaggcaacctgatc
ttcaacggagtcaccgtcgctaccggggcatggcaggggaccgccgacaccgcatccgca
cagtcctttgacgtgaagtattaccttgaagcgaccggcaacgaagcaggcatccaggca
accaccagcggaggaatggacgccctccagcagatcctagtagtcgagtatgccgcggga
acagcgtcggttgccgggttcaccgccgatccgacttccggtgatgcaccgctgaacgtg
acgttcaccgacgcttccatcggcgagattacatcctatgcatgggacttcgagaccgac
ggcacggtcgacagctacgaccagaacccgagtcatgagtacaccgatgccgggacatat
accgtaacgcttacggtcaccgggccgggcggttcggatgacgagaccaggacggactac
atcacggtgacagacggatcaggaccgggacccgtgggactcgcagatacagcatggccg
aaataccagtgtgatacccgcaacaccggccagtcatcagtcaacgggccgcagacaaat
aacgtcctctggaccgccgcaataggtggctatatatatggttcagaagcgatcggtgca
gacggcaccatctatgtcggaagcgcaaccggcaatctctatgctctgaaccctgacggc
accgtgaaatggtcatttacgaccggtggggcgatatatggtacaccggcgatcagtgca
gacggcaccatctactttggaagccgtgacaacaggatctacgcattaaatcccgacggc
accgtgaaatggtcatacaccactggatacatggtcgacagttcgccgacaatcggatcg
gacgggacaatctacatcggaagccttgactgcaaactctatgcactgaaccccgatggc
acagtaaaatggacctacgacactaattataaaataggcagtgttgcacctgctatcggc
gcagacggtaccatctacgttgcagacgattggggaagtttctatgcactgaatcctgac
gggaccctgaaatggtcatacgaccttggcaggcgcacctatagagccgcaattggagca
gacagcactatctatctcgtcggacagagcgacggtacgatgtatgcactcaatgccgat
gggaccctgaaatggtcctataaagctggcgttaggctcttctggtcaccggcaattgca
tcagacggcaccatctatgtcggaagcacttggggtggcaataaactgtttgcgataaat
cctgacgggaccctgaaatggtcatataccaccggaggtggcggtgtccagcgctcagcc
gcaatcggggctgacggaacggtctatttcggaagtagtgatggtaatgcatatgccctc
aatcccaacggaacattgaaatggaagtatgcaacaggagagattgtaagtactccatct
atcggatccgatggaacgctctacattggtaacaatcagggcatagtgtatgcatttaaa
gatgttgctccggtcgcgaacttctcggccgacgtaacaagcggcgatgccccgctgaac
gtgacgttcaccgaccagtccacgggttcgccgacctcgtggtcctgggacttcggtgac
ggagagacctccgacgagcagaacccgacccacatctactccacgcctgagaccaattat
accgttacattgactgtcgaaaatgcgcttggaaacgacacggagacaaaaattgattat
atccgcgtgggagtggtcactcccgcacctgtcgctgacttcacagcagaagtcacgagc
ggggacgtcccattgagagtccagttcaccgacctgtcgaccgctgcaaccggatgggcc
tgggacttcgacaacgacggaacagttgacagcaccgcgcagaacccggtgcatacttat
ggtgatgctggcatctactcggtcaacctcacggtcataaacgctggaggaagcaattcc
gaggtgaagattgattacatcactgtatcttctacacctacagaacctgaacccgttgct
gctttcactgctgatgtaactgatggaactgctcctctcacagttaatttcacggatcaa
tccgcaggcacacctacctcgtggctctgggacttcggggacggagctaattcaactgcg
cagaaccctgtgcatgcttattctgcagcaggcaactacaccgtaaatctaaccgtagaa
aatgctgctggttctgactttgagttaaaatcggattacataaaagtttccgagatttcc
ggatcaaccgttactctctattttgaccctgcaagttcctcggtttcagaaaacgaatct
actgaaataaatctcgttgcaagcaacttccctgcaggtctttcaggctacaacctgacc
gttgttatcgacgacccggatgttgccgaaatagtcgacatagagtacccgacctgggct
cttattactgagaactctaccctgccagggacttcgatctacatgaagaccgttgacctg
gaagattccgttcaagaaggggcagcagatgttgtgcttgctactctcacggtttccgga
aaggagaaaggatctgcgaacctttctataggggttaaacgtctggaggaagattccgga
gactctatcgaaccagctcttctggcagggacaattgaagtaacccttctttctcctctt
cctgatcaggaatatgcacctaaggaccttgacggagacggactctatgaagacctcacc
ggaaacggggagttcagtttcgtggatatagtggcatacttccataacatggactggata
gaggaaaacatgcaggtggagtatttcgacttcaacggaaacggaaggatagactttgat
gatgtagtgcggatgtttgcaatgatatga
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