KEGG   Methanosarcina siciliae C2J: MSSAC_2656
Entry
MSSAC_2656        CDS       T03863                                 
Name
(GenBank) Cell division protein FtsH
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
msj  Methanosarcina siciliae C2J
Pathway
msj04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:msj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MSSAC_2656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msj03019]
    MSSAC_2656
   03009 Ribosome biogenesis [BR:msj03009]
    MSSAC_2656
   04131 Membrane trafficking [BR:msj04131]
    MSSAC_2656
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msj04147]
    MSSAC_2656
Messenger RNA biogenesis [BR:msj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     MSSAC_2656
Ribosome biogenesis [BR:msj03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    MSSAC_2656
Membrane trafficking [BR:msj04131]
 SNARE
  SNARE associated proteins
   Others
    MSSAC_2656
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    MSSAC_2656
Exosome [BR:msj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSSAC_2656
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_5 AAA_2 TIP49 AAA_14 AAA_22 AAA_33 NACHT nSTAND3 Sigma54_activat IstB_IS21 Mg_chelatase NPHP3_N ABC_tran AAA_28 RNA_helicase Parvo_NS1 AAA_7 AAA_24 CDC48_2 AAA_18 AAA_lid_PRS2_C Vps4_C Zeta_toxin TsaE AAA_17 ATPase NB-ARC AAA_3 AAA_11 SLFN-g3_helicase ResIII AAA_25 ORC-CDC6-like PhoH Sigma54_activ_2 AAA_30 DUF815 KAP_NTPase
Other DBs
NCBI-ProteinID: AKB37246
UniProt: A0A0E3LDG8
LinkDB
Position
3302421..3304715
AA seq 764 aa
MTEEGKSIIKLKVAEADQRDVGKGIVRIDERFREKLSLKPFDVVEIKGGKSTSALIGRPY
PSDAGLDIIRMDGLIRTNAKTSIGEYADISKADWKEAKSVTLAPVAQGMQIYAPSETLKA
VFINRTASKGDFISTTSLRRSKGRENFGKGVMFEDFFQDFFGQGFGPSFGLGEIKLQVVS
TAPAGIVKITDMTHVELLPEAMEIVSEQNIPTVMYEDLGGLKDAISKVREMIELPLKHPE
LFDRLGIDAPKGVLLQGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE
IFEDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGATN
RPEALDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSALRRILPRINLNEPEISKEILDTLQVTREDFENALKDVQPSAIREIL
IEVPNVSWEDVGGLERVKELLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVSPSIIFLDELDSLAPIRGT
SVGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
EGARREIFRVHTKNMALAEDVDIEKLVSFTDQYTGADIAAVCKKAGRYALREDLHAKEVR
QKHFLQAIEETGPSVTPDTMKYYEAIKGELRKRKSKEIENPYYV
NT seq 2295 nt   +upstreamnt  +downstreamnt
ttgactgaagagggtaaatcaattataaaacttaaggttgcagaagctgatcaacgggat
gtcggaaaagggattgtccgaatcgacgaaagattcagggaaaaacttagcctgaagccc
tttgatgttgtagagattaaaggagggaaatcaacttctgcccttataggccgtccctat
cccagtgatgccgggcttgatatcatccgcatggacgggctcattcgcaccaatgcaaaa
accagtataggggaatatgcggatatcagcaaagcagactggaaagaggcaaagagtgta
acccttgctcctgtagcccagggcatgcagatctatgccccaagtgaaaccctcaaggcc
gtatttataaaccgcacggcttcaaaaggggatttcatttccactacaagcctcaggagg
tccaaggggagggaaaattttgggaaaggggtcatgtttgaagattttttccaggacttt
ttcgggcaaggcttcggaccatctttcgggcttggagaaattaaactgcaggtggtatct
accgctcctgcgggaatagttaagattacggatatgacgcatgtagagctcctgccggaa
gctatggaaatagtctccgaacaaaatatccctactgtcatgtatgaggacctgggaggg
ctcaaagatgccatcagcaaggtaagggaaatgatagaactgccccttaagcatcctgaa
ctctttgacaggcttggaatcgatgctccgaagggagtactgctgcaaggcccacccgga
acgggaaagacaatgcttgcaaaagcagttgctaacgaatcagatgcctatttcatttcc
atcaacggcccggagataatgtccaagtactacggggaatccgagagggcaattcgtgag
atctttgaggatgccgaaaagaatgctccggcaattatcttcctggacgagattgactcg
attgcccctaagagagctgaagtgaccggagaagtagaaaggagagtcgttgcccagctt
ctttccctgatggacgggcttaaggcccgcaagaatgtcattgtcataggagcaaccaac
cgtcctgaagcccttgatattgcactccgccgcccgggcaggtttgatagggaaattgaa
ttgagggttccggatacggaaggaaggcttgagatattccagatccacacaaggggaatg
cctcttgccgaaaatgtaaacctgatggacttcgcccagataacctacgggtttgtggga
gccgatattgccgcactctgcagagaagcagccatgagtgcacttaggcggattttgccg
agaattaaccttaacgaacctgaaatttcaaaagagatcctcgatacccttcaggtcaca
agggaagactttgaaaatgcccttaaagatgttcagccgtcagccataagagaaatcctg
atagaggttcccaatgtcagctgggaagatgtgggcggtcttgagagagtaaaagagctt
cttaaagaagttgtggagtggcctttgaagaatcctgagtcttacagagatataggggtt
gaagctcccaaaggtgtactcctatatgggcctccgggcaccggaaagaccctgcttgca
aaagccattgcccacgagtccgacgccaactttataactgccaagggaagcgacctgctc
tccaaatggtacggggaatccgaaaagaggattgcagaagtttttacgcgggcaaggcag
gtttctccatccattattttccttgatgagcttgattcgcttgcccccatccgcgggact
tccgtaggcgagccccaggttacagccaggatccttaaccagctactctccgagatggac
gggcttgaggaactaagggctgttgtggtaataggggcaaccaaccggcctgatataata
gacccggctctcctaaggcccggacgttttgatgagctgatccttgtccctgttccggat
gagggagcccgcagggaaattttcagggtccatacaaaaaatatggcacttgcagaggat
gttgatattgaaaaactcgtttcttttacggaccagtatacaggtgccgacatcgcagct
gtgtgtaaaaaagcaggaaggtatgcgctgcgggaagacctgcacgcaaaagaagtcaga
cagaaacatttcctgcaggcgattgaagaaacgggaccttcagtcactcctgatacgatg
aaatactacgaggcgataaaaggagaactgagaaaaaggaagtcaaaggaaatagaaaac
ccctattatgtatga

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