Methanosarcina siciliae C2J: MSSAC_2656
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Entry
MSSAC_2656 CDS
T03863
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSSAC_2656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msj03019
]
MSSAC_2656
03009 Ribosome biogenesis [BR:
msj03009
]
MSSAC_2656
04131 Membrane trafficking [BR:
msj04131
]
MSSAC_2656
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msj04147
]
MSSAC_2656
Messenger RNA biogenesis [BR:
msj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSSAC_2656
Ribosome biogenesis [BR:
msj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSSAC_2656
Membrane trafficking [BR:
msj04131
]
SNARE
SNARE associated proteins
Others
MSSAC_2656
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSSAC_2656
Exosome [BR:
msj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSSAC_2656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_22
AAA_33
NACHT
nSTAND3
Sigma54_activat
IstB_IS21
Mg_chelatase
NPHP3_N
ABC_tran
AAA_28
RNA_helicase
Parvo_NS1
AAA_7
AAA_24
CDC48_2
AAA_18
AAA_lid_PRS2_C
Vps4_C
Zeta_toxin
TsaE
AAA_17
ATPase
NB-ARC
AAA_3
AAA_11
SLFN-g3_helicase
ResIII
AAA_25
ORC-CDC6-like
PhoH
Sigma54_activ_2
AAA_30
DUF815
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKB37246
UniProt:
A0A0E3LDG8
LinkDB
All DBs
Position
3302421..3304715
Genome browser
AA seq
764 aa
AA seq
DB search
MTEEGKSIIKLKVAEADQRDVGKGIVRIDERFREKLSLKPFDVVEIKGGKSTSALIGRPY
PSDAGLDIIRMDGLIRTNAKTSIGEYADISKADWKEAKSVTLAPVAQGMQIYAPSETLKA
VFINRTASKGDFISTTSLRRSKGRENFGKGVMFEDFFQDFFGQGFGPSFGLGEIKLQVVS
TAPAGIVKITDMTHVELLPEAMEIVSEQNIPTVMYEDLGGLKDAISKVREMIELPLKHPE
LFDRLGIDAPKGVLLQGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE
IFEDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGATN
RPEALDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVG
ADIAALCREAAMSALRRILPRINLNEPEISKEILDTLQVTREDFENALKDVQPSAIREIL
IEVPNVSWEDVGGLERVKELLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVSPSIIFLDELDSLAPIRGT
SVGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDIIDPALLRPGRFDELILVPVPD
EGARREIFRVHTKNMALAEDVDIEKLVSFTDQYTGADIAAVCKKAGRYALREDLHAKEVR
QKHFLQAIEETGPSVTPDTMKYYEAIKGELRKRKSKEIENPYYV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaagagggtaaatcaattataaaacttaaggttgcagaagctgatcaacgggat
gtcggaaaagggattgtccgaatcgacgaaagattcagggaaaaacttagcctgaagccc
tttgatgttgtagagattaaaggagggaaatcaacttctgcccttataggccgtccctat
cccagtgatgccgggcttgatatcatccgcatggacgggctcattcgcaccaatgcaaaa
accagtataggggaatatgcggatatcagcaaagcagactggaaagaggcaaagagtgta
acccttgctcctgtagcccagggcatgcagatctatgccccaagtgaaaccctcaaggcc
gtatttataaaccgcacggcttcaaaaggggatttcatttccactacaagcctcaggagg
tccaaggggagggaaaattttgggaaaggggtcatgtttgaagattttttccaggacttt
ttcgggcaaggcttcggaccatctttcgggcttggagaaattaaactgcaggtggtatct
accgctcctgcgggaatagttaagattacggatatgacgcatgtagagctcctgccggaa
gctatggaaatagtctccgaacaaaatatccctactgtcatgtatgaggacctgggaggg
ctcaaagatgccatcagcaaggtaagggaaatgatagaactgccccttaagcatcctgaa
ctctttgacaggcttggaatcgatgctccgaagggagtactgctgcaaggcccacccgga
acgggaaagacaatgcttgcaaaagcagttgctaacgaatcagatgcctatttcatttcc
atcaacggcccggagataatgtccaagtactacggggaatccgagagggcaattcgtgag
atctttgaggatgccgaaaagaatgctccggcaattatcttcctggacgagattgactcg
attgcccctaagagagctgaagtgaccggagaagtagaaaggagagtcgttgcccagctt
ctttccctgatggacgggcttaaggcccgcaagaatgtcattgtcataggagcaaccaac
cgtcctgaagcccttgatattgcactccgccgcccgggcaggtttgatagggaaattgaa
ttgagggttccggatacggaaggaaggcttgagatattccagatccacacaaggggaatg
cctcttgccgaaaatgtaaacctgatggacttcgcccagataacctacgggtttgtggga
gccgatattgccgcactctgcagagaagcagccatgagtgcacttaggcggattttgccg
agaattaaccttaacgaacctgaaatttcaaaagagatcctcgatacccttcaggtcaca
agggaagactttgaaaatgcccttaaagatgttcagccgtcagccataagagaaatcctg
atagaggttcccaatgtcagctgggaagatgtgggcggtcttgagagagtaaaagagctt
cttaaagaagttgtggagtggcctttgaagaatcctgagtcttacagagatataggggtt
gaagctcccaaaggtgtactcctatatgggcctccgggcaccggaaagaccctgcttgca
aaagccattgcccacgagtccgacgccaactttataactgccaagggaagcgacctgctc
tccaaatggtacggggaatccgaaaagaggattgcagaagtttttacgcgggcaaggcag
gtttctccatccattattttccttgatgagcttgattcgcttgcccccatccgcgggact
tccgtaggcgagccccaggttacagccaggatccttaaccagctactctccgagatggac
gggcttgaggaactaagggctgttgtggtaataggggcaaccaaccggcctgatataata
gacccggctctcctaaggcccggacgttttgatgagctgatccttgtccctgttccggat
gagggagcccgcagggaaattttcagggtccatacaaaaaatatggcacttgcagaggat
gttgatattgaaaaactcgtttcttttacggaccagtatacaggtgccgacatcgcagct
gtgtgtaaaaaagcaggaaggtatgcgctgcgggaagacctgcacgcaaaagaagtcaga
cagaaacatttcctgcaggcgattgaagaaacgggaccttcagtcactcctgatacgatg
aaatactacgaggcgataaaaggagaactgagaaaaaggaagtcaaaggaaatagaaaac
ccctattatgtatga
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