Methanosarcina siciliae C2J: MSSAC_3006
Help
Entry
MSSAC_3006 CDS
T03863
Name
(GenBank) 1,4-alpha-glucan branching enzyme
Organism
msj
Methanosarcina siciliae C2J
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
Alpha-amylase_C_2
hDGE_amylase
DUF3459
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AKB37596
UniProt:
A0A0E3LDN8
LinkDB
All DBs
Position
3712809..3714683
Genome browser
AA seq
624 aa
AA seq
DB search
MPNKPELLPLHKLGAREDKQTSGRINFGLFLPGVSEEGENELLGRVIHEKDQFLQDIPPM
DFEMEHSKDPDYGDYWSATINIKAEDKLKPYSAWGTPGKYVYRYCLKTSKKPELIDWIID
PFAREFGVGKLSAFTLGYEPYEWDKHELAWKTPFVNDIILYELMISEFADDIKGTIAHLD
YLADLGINCIELMPLSNVEKRVDWGFAPIGYFGVDERFGNRKDMQKLIDAAHQKGIAVIV
DSVYAHTSHLFPYYYVYNELGYPQDENPFMGPFAENAFGISTDFNHKFVRDFFLTVNNHW
LDSYHVDGFRYDYVPGYWLDNSDNGYTKLVRDTYQLVKAKKGSSNHWQRFFEGESVNLIQ
CAEQLQKPVEILNKTHSNCTWQNGTLSTAREIAGNPGKLTDLGFLFGLVDYPAEVQNNGD
KLTKTTLQYLENHDHSRFICTFGTVPGDNELLKEGNRALWYRVQPYLIGLLTAKGIPMLW
QGQEFGENYFLPKEGWGRVLLYRPVRWEYFYTSEGRSLVNLVRKLVKLRRNKPQFSRGEH
YFCNDYALYQSRNLMLFSRTYNGVFSLVALNFGARAQAVSFKFPSAGNYREELHGKDNLM
GVSAGEDVQLNIPGNYGRIWTLET
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaacaaacctgaacttctaccgctccacaagcttggggcccgggaagataaacag
acttccgggagaataaatttcgggctttttttaccgggtgtgtcggaagaaggagaaaat
gagctccttgggagggttattcatgaaaaagaccagttccttcaggatatacctccaatg
gactttgaaatggaacattcgaaggacccggattatggggattactggtctgcaacgata
aatatcaaagctgaagataagctcaaaccttattctgcatggggaacccctggaaagtat
gtctatcggtattgccttaaaacctcgaaaaagccagaacttattgactggattatcgat
ccattcgccagggaattcggggtcgggaaattatccgccttcactctcgggtacgaaccc
tatgagtgggacaaacatgagctggcatggaaaacccctttcgtaaatgacattatcctc
tatgagctcatgatcagcgagtttgcggatgatataaaagggacgattgcccatctggat
tacctcgcagacctgggaattaattgtatagaactgatgcctctttcaaacgttgagaaa
agggtggactggggatttgccccgatagggtatttcggggtggacgagcgtttcggaaat
cgaaaagacatgcaaaagttgattgatgcggctcaccagaaaggcattgcagtcatagtg
gattcggtttatgcgcatacaagccatctttttccgtattactatgtttacaacgaactt
ggataccctcaggacgagaaccccttcatgggccctttcgctgaaaatgctttcggaata
agtacggacttcaaccacaaatttgtccgggatttctttttgacggtcaacaaccactgg
cttgacagctatcatgtagatggtttcagatacgactacgtgcccgggtactggctagat
aattcggacaacggttatacgaaacttgtacgggacacttaccagctggttaaagcaaaa
aaaggttcttccaatcactggcaacgtttttttgaaggagaatccgtaaacctcatccaa
tgtgccgagcagcttcaaaaacctgtagaaatcctgaataaaactcacagtaactgtacc
tggcaaaacgggacactgtcaacagccagggaaatagccgggaatcccgggaagttgacc
gacctgggcttcctttttggcctcgttgattatccggcagaagttcagaacaacggggat
aaactcacaaaaacgactctgcagtacctggaaaatcatgaccattcccgttttatctgt
acttttggaaccgttcccggtgataatgaacttttaaaagaagggaaccgtgccctctgg
taccgggtacagccttacctgataggcctgcttacggcaaaaggaattcctatgttatgg
caggggcaggaatttggcgaaaattacttccttcctaaggaagggtggggaagagtgctt
ttgtacagacccgtgcgctgggaatatttctatacttccgaaggcaggtcactggtcaat
cttgtcaggaaacttgttaagcttcgcaggaataaacctcagttttcccgaggagagcat
tacttctgcaatgattatgccctctatcagtcccgaaatcttatgctgttttcccgaact
tacaacggagttttcagcctggtagcattgaacttcggagcccgggcgcaggcggtatct
ttcaagtttccatccgcgggcaactacagggaagaacttcacgggaaggataatttaatg
ggagtttctgcgggggaggacgttcagcttaatattcctggcaactacggaaggatctgg
acactggaaacttga
DBGET
integrated database retrieval system
