Methanosarcina siciliae C2J: MSSAC_3085
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Entry
MSSAC_3085 CDS
T03863
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03410
Base excision repair
msj03430
Mismatch repair
msj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSSAC_3085
03430 Mismatch repair
MSSAC_3085
03440 Homologous recombination
MSSAC_3085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msj03400
]
MSSAC_3085
DNA repair and recombination proteins [BR:
msj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSSAC_3085
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSSAC_3085
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSSAC_3085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB37675
UniProt:
A0A0E3PQL1
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Position
3818735..3819733
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AA seq
332 aa
AA seq
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MKEPQNQLKAKTLILTHGDSDGICSGAIAKSAYPEAYVYFTSPVSLLDKLDLIEDVENLI
ICDIAIEEKRCSELYSALNKLAEECNLYYIDHHPLPEGCGKENWFFHDTGVCASELTYRV
FEEILSQEMRRVAIYGAIGDFCDNTPCVRSWVRDWDKRSLFFQAGTLIQAILHKGKDYDF
KRILLEPLSKDVIPSNIPDLLELAREAAINEEKIRLFVKENVEVLKNSAYIVNTNNSISK
AAIYAASYGKREVGIAAEYREKKGVYDLSIRSRGKADINRLLRSIAPKFGGSGGGHPVAA
GARIPENSLEAFLRAFDKKLGEANEVKYNGNK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccccagaaccagcttaaagcgaaaaccttgatcctgactcatggtgactct
gacgggatatgttcgggagcaattgcaaaaagtgcctatccggaagcatatgtctatttc
acaagtcctgtcagtcttctggacaagttagatctcattgaagacgttgagaatcttata
atctgcgatattgctatagaggaaaagcgctgttctgaactctactctgcactcaataaa
ttagcggaagaatgcaacctgtattacattgatcaccatccgctgccggaagggtgcgga
aaagagaactggttttttcacgatacgggggtatgcgcctctgaactcacttacagggta
tttgaagagatcctgagccaggaaatgaggagagtggcaatctacggagctataggcgac
ttctgtgacaatacaccctgtgtaagaagctgggtaagagattgggataaaaggagccta
ttttttcaggccgggactctgatacaggcaatacttcataaggggaaagactatgatttc
aagagaatcctgcttgaacccctctcaaaagatgtaattccttcaaatattcccgatctg
ctcgagcttgccagggaagctgcaattaacgaagagaaaatcaggctttttgttaaagaa
aatgtggaagtcctgaaaaacagtgcgtatattgtaaatacgaataactccatctcaaag
gcagcgatctatgcagcctcctacggcaaaagggaagtgggaattgcagctgaataccgg
gagaaaaagggtgtttacgacctgagcattcgttcccggggtaaggctgacataaaccgt
ctccttcgctcaattgctcctaagtttggagggagcggcggaggacatcctgttgcagca
ggagcgcgtattcctgaaaattcccttgaggctttcctcagagcttttgataaaaagctt
ggggaagcaaatgaggtaaaatacaatggaaacaagtaa
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