Methanosarcina siciliae C2J: MSSAC_3136
Help
Entry
MSSAC_3136 CDS
T03863
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSSAC_3136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msj03400
]
MSSAC_3136
Enzymes [BR:
msj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSSAC_3136
DNA repair and recombination proteins [BR:
msj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSSAC_3136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
DUF4400
Motif
Other DBs
NCBI-ProteinID:
AKB37726
UniProt:
A0A0E3LDR4
LinkDB
All DBs
Position
3882410..3883243
Genome browser
AA seq
277 aa
AA seq
DB search
MSADKLFFGTAGVPRSAKASNSPAGIERIRELGLDCMELEFVQGVRMREKGAGNVLNTAR
KENVTLSVHAPYYINLNSPEEEKLKASVERIYQAARIGSLCGAESIVLHAAFYQKSDKQA
VYENVSKALGELAEQLRAENIPAVLRPETMGKRTQFGTLEEVLALSEEIEGVMPCLDFSH
IHAREGKENSYPEFRAILSKVEDSLGKEGLANMHMHISGIEYNRNGEKRHLVLKESDFNY
PELLKVLKEFEVKGLAICESPNLEEDALLLKKTYMEL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgataaacttttttttgggactgccggagttcccagaagcgcaaaagccagc
aatagccctgcaggaattgagcgaataagggaactcgggctcgactgtatggaacttgag
ttcgtgcagggggtgcgcatgagagagaaaggggcaggaaacgtgctgaacactgccaga
aaagaaaacgtgaccctgagcgtacatgccccttactatatcaacctgaactccccggaa
gaagagaaattaaaagccagcgtggaaaggatttaccaggctgcaaggataggcagcctc
tgcggagcagagtcgatagtactgcacgcagccttctatcagaagagcgataaacaggct
gtctacgagaatgtctcaaaagccctcggagagcttgcagagcaactccgggccgagaat
atccccgctgtcctcaggcctgagaccatgggcaaacgtacgcagtttggaacccttgaa
gaagtacttgccttaagtgaagaaatcgaaggggtaatgccctgtcttgacttttcccac
atacatgcaagggaaggaaaggaaaactcctatcccgagtttagggcaatcctctcgaaa
gtagaagactcccttggaaaagaagggcttgcaaacatgcacatgcatatctcgggaata
gagtataacagaaacggggaaaaaagacacctggtccttaaagagtccgacttcaactac
cccgagctcttaaaggttctcaaagaattcgaggttaaagggcttgccatctgcgaaagc
ccgaacctggaagaagatgcgcttctgttaaagaagacttacatggaattgtaa
DBGET
integrated database retrieval system
