Methanosarcina siciliae C2J: MSSAC_3144
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Entry
MSSAC_3144 CDS
T03863
Name
(GenBank) Chitin binding protein
Organism
msj
Methanosarcina siciliae C2J
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_5
PKD_4
PKD
LRR_8
PKD_3
DUF7076
Motif
Other DBs
NCBI-ProteinID:
AKB37734
UniProt:
A0A0E3PSC0
LinkDB
All DBs
Position
complement(3890460..3896417)
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AA seq
1985 aa
AA seq
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MQKKRFFVLTTVMLLLSIAMLAMPAVATGEATITRTITPSEVSDGDTYNVTLTASFNTDE
DSIVIHEDLPEDWSLTEVDSGRYIWNTSEEDYTFLDFYGTVNLTGVTDTITYSVTVPDET
VSGTYDYGPSYVAGESESEEEYAWTVNTTSDDTVTINGTILNIYSTALENTNPGAPDPGI
PGFVGPNGDGKTDCGTVNPIFITWASTVVDYSPANQSITAGFSNPSIALGPVTGDNFNIV
SLGDLDQDQINAGELPGSVTLGFDLPIANGEGPDLAVFENGFIVSGTEKMSAELGYVEVS
TDGIVFARFPSISLTSGQAGGYGSIDPTYVYNLAGKHVNAYGDSWGTPFDLSTLAQAPEV
LNGSVDLNSINYVRIVDIPGSGDFKDSQGNPIYDAWVTWGSGGLDLEAVGVINIGVVSAP
VANFTADVTSGIAPLTVQFYDGSTGVIILDYAWDFDNDGIVDSTLQNPSFTYEAAGTYTV
NLTVSNTGGSSTETKADYIVSVLPDSPVADFSVDVTSGPAPLTVQFTDLTTNGPISWAWD
FESDGIIDSYEQNPSWTYNAAGNYTVAMTAANLVASDTVTKVNLTSVENLPPMADFSADP
VATLIGCSVQFTDLSTNSPTSWQWDFNNDGTIDSTMQNPSYTYTTAGTYTVNLTVSNPVG
SGDEVKTDYIIVKEQASPASDFTYTSDGSSITITKYIGSDGIVIIPAEIEGLPVTTIGAS
AFYGCSALTTVTIPDSVTTIGTSAFQVCSALTTVSIPDSITTIGTSAFQDCSALTTVTIG
SGVTTIGTSAFQDCSALATVTIGSGVTTIGTSAFQDCSALTTVTVPDSVTTIGDSAFGGC
SGLTIVTIGSRIASIGGVTSSSSFVFSDCSALIAIDVDADNSVYTSIDGILYSKDATTLI
RCPLGKTGSISVPDCVTTIERVAFYGCTGLNSVTIPDSVTSIGTYAFTACSALTAIDVDT
DNSVYASIDGILYNKDITTLILCPSGKTGSVSIPDSVTTIDVSAFSGCTGLNSVTIPDGV
TSIGTYAFYGCSGLATVTIPDSVTTIDASAFRGCTALASVTIGNNVTSIGYYAFRDCSGL
TTVTIPDSVTSIPSYAFSGCSGLTAVTIGSGVTNIGENAFSGCSALAAIDVDTDNSVYAS
IDGILYNKAITTLIQCPSGQTGSVTIPDSVTSIGKFTFRDCSAPIVMVFEGNAPTVATYW
NYNCPNIAVYYYEGATGFTTPLWNGVPCYPALVAATGNFSSNIVYGSAPLTVEFTYTGVG
ANTFAWDFDNNGTVDSTMKNPSYTYDVPGTYSVRLNVSNPWGSNSEVKTDYITIVEPVDN
FTYISDGTSVTITGYIDPVGDVVIPSTIKGMPVTSIGASAFKSNTNITSATIPDSVTSIG
DYAFLSCSGLTTVTIGSGVTSIGDSAFYGCTALTSVTIGNNVTSIGTYAFRGCTALTSVT
IGNNVTSIGTYAFYGCTYLTSVTIGNNVTSVGSSAFQDCSALTSVTIPDSVTTIDASAFR
DCTALTSVIIPDSVTTIGSSVFRDCSALTSVTIGNNVTTIGSSMFRDCTALTSVMFTGNA
PDSVSSSWASGCPDLVVYYYESATGFTTPTWNGVACYPLTAAPVADFEADVTSGVGPMIV
NFTDLSTRSPDTWEWDFNNDGTVDSTEQNPSYTYTSAGTYTVNLTVANANGTDSEAKTDY
ITVSEPSTPAEPVAAFTADVIAGTAPLTVNFTDQSTGSPTAWAWDFDNDGNVDSTEQNPS
HTYSAAGNYTANLTVENAAGMDFELKTDYIEVSEASGSTVTLYFDPESSSVAENESTEIS
ILASNFPAGFSGYNLTVIIDDPAVAEIIDIEYPSWALITENSSLPGTSIYLKAVDGEDTV
QVGAADVVLATLTVSGKEKGSANLSIGVSRLDDDSGNVIEPALLAGTIEVTLLSPLPDQE
YAPKDLDGDGLYEDLTGNGEFSFVDIVAYFHNMDWIEENMPVEYFDFNGNGRIDFDDVVD
MFAMI
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaaaggttttttgttctgacaacagtaatgctcttactttccatagccatg
ctggccatgccagctgttgctaccggtgaagcaacaataacaagaacgattactccctcc
gaagtatctgacggagatacctacaatgtaacccttacagcttccttcaatactgacgag
gattccatcgtaatacacgaagatcttcctgaagactggagtcttactgaagttgacagt
gggcgttacatctggaacacttccgaggaagattatacattcctggatttttacggcaca
gtcaacctcaccggagtcactgacaccataacctacagtgtcacggttcccgacgaaaca
gtatcaggtacctatgactacggaccaagctatgttgcaggtgaatctgaaagtgaggag
gaatatgcatggacggtaaataccacaagcgatgacactgtgaccatcaacgggaccatc
ctcaacatttattctactgcactggagaacaccaatcccggagccccagatccggggata
ccaggtttcgtaggtccgaacggtgacggcaagaccgactgcggcactgtgaaccctata
tttataacctgggccagcacggtcgtggactactctccagccaaccagagcatcacggca
gggttttctaatccgagcatcgccctcggtccggtgaccggcgataacttcaacatcgtc
agcctgggagatctcgatcaagatcagataaatgcaggcgaactacctggatccgtaact
ctcgggttcgatttacccatagctaacggcgaaggaccggacctggcggtttttgagaat
ggtttcatcgtttcaggcacggagaaaatgtccgccgagctaggttatgtggaggtatcc
actgacggcatcgtcttcgcgcgcttcccctcgatatccctaacttctggacaggcaggc
ggatatgggagtatagaccccacctatgtatacaacttggcagggaaacacgtcaatgct
tatggcgattcctggggcacgcccttcgacctgagcacccttgcgcaggcacccgaagtg
ctgaatgggagtgtggaccttaactccatcaactacgtccgcatcgtggatatcccgggc
agcggggacttcaaggactcccagggcaaccccatctatgatgcctgggtgacctggggt
tcaggcggattagacctggaggcggttggcgtcatcaacattggtgtggttagtgcacca
gtggctaacttcaccgccgatgtgacctccgggatcgcaccgcttacggtacagttctat
gatgggagcactggtgtaataatacttgactatgcctgggattttgataacgatgggatt
gtggactcaactttacagaacccctcgttcacctacgaggctgccggcacatacaccgtc
aatctgacggtatccaacaccggcggatcgagcaccgaaaccaaggccgattacatcgtc
tccgtcctgccggactcaccggtagccgatttctccgttgatgtgaccagcggccccgct
ccgctgaccgtgcagttcactgaccttaccaccaacggaccgatcagctgggcctgggac
ttcgagtccgatggcataatcgactcgtacgagcagaatccctcctggacatataatgcc
gctggtaactatacagtggctatgactgccgctaacctggtggcttcggatactgtcacc
aaggtcaatctgacctccgtggaaaatttaccaccgatggctgatttctcagctgatcct
gtggccactttaataggatgcagcgtgcagttcaccgacctgtctacgaactctccgact
tcctggcagtgggacttcaacaatgacggtacaattgacagtacgatgcagaatccgagc
tacacatatacgaccgcgggaacatacaccgtcaatctgacggtgagcaaccctgtgggg
agcggtgacgaagtcaagaccgactacatcatcgtgaaagagcaggcttctcctgccagt
gatttcacctacaccagtgacggcagctctattaccatcactaaatacataggatcggat
ggtattgtcatcatacccgcggagatagagggactgcctgtcactactatcggtgccagt
gcgttttacggctgctctgccctgacaactgtaaccatcccggacagcgtcacaaccatc
ggcaccagtgcgttccaggtttgctccgctctgacaacggtgagcatcccggacagcatc
acaaccatcggcaccagcgcgttccaggattgctccgctctgaccacagtgacaatcggt
agcggcgtcactaccatcggcaccagcgcgttccaggattgctccgctctggcaacagtg
acaatcggtagcggcgtcactactatcggcaccagcgcgttccaggattgctccgctctg
acaactgtaaccgtccccgacagcgtcactaccatcggcgacagtgcgttcggcggctgc
tccggactgacaatagttaccatcggcagcaggattgcgagcatcggcggggttacgagc
agcagcagttttgtgttctctgattgctctgctctgattgctatcgatgttgatgccgat
aacagtgtgtacactagcatcgacggaatcttgtacagcaaagacgccacaactttaata
cgatgtccgttaggaaagaccggttccatatccgtgccggactgcgtcaccacaatcgaa
agggttgcgttctatggttgcaccggtcttaactctgtgactattccggacagtgtcacc
agcatcggcacctatgcgttcactgcttgctctgctctgactgcgatcgatgtcgatacc
gataacagtgtgtacgccagcatcgacggaatcctgtacaacaaggacatcacaactttg
atactatgtccgtcaggaaaaaccggttctgtatccatcccggacagcgtcaccaccatt
gatgtctctgcgttctctggctgcaccggtcttaactctgtgaccattccggacggtgtc
accagcatcggcacctatgcgttctacggctgctccggactggcaaccgtgaccatcccg
gacagcgtcaccaccattgatgccagtgcgttccgtggctgcaccgcccttgcctctgtg
accatcggaaacaatgtaaccagcattggctactatgcgttccgcgactgctccggcctg
acaacagtgaccatcccggacagcgtcaccagcatcccaagctatgcgttcagtggctgc
tccggcctgacagcagtaaccatcggcagcggagtcaccaacataggtgagaatgcgttc
tctggttgctctgctctggccgcaatcgatgtcgataccgataacagtgtgtacgccagc
atcgatggtatcctgtacaacaaggccatcacaacgctgatacaatgtccctctggacag
accggttctgtaaccatcccggacagcgtcacaagtatcgggaaatttacgttccgcgac
tgcagtgctccgattgtcatggtgttcgagggcaacgcgcctacggtagccacgtactgg
aattataattgccctaatatagcagtatactactacgaaggcgctaccggcttcacaacc
ccgctgtggaatggtgttccgtgctaccctgctctcgtcgccgcgaccggcaatttcagc
tcgaacatcgtctatggcagcgcaccgctcacggtagagttcacctatacgggtgtggga
gcgaacacgttcgcctgggacttcgacaataacggcacggtggacagcacgatgaagaac
cccagttacacctacgatgtgccgggtacatattcggtcaggctgaatgtcagcaacccc
tggggcagcaacagtgaggtcaagaccgactacatcaccatagtcgaaccggtcgataac
tttacctatatctccgacggcacttcggtgaccataaccggttacattgatccggtcggt
gatgtcgtcataccgagcacgatcaagggcatgcctgtcaccagcatcggcgccagtgcg
tttaagagcaataccaacatcacctcggcgaccataccggacagcgttaccagcataggt
gactacgcgtttctaagctgctccggcctgacaacagtgaccatcggcagcggagtcacc
agcatcggcgacagcgcgttctacggctgcaccgcccttacctctgtgaccataggaaac
aatgtcaccagcatcggcacctatgcgttccgcggctgcaccgcccttacctctgtgacc
ataggaaacaatgtcaccagcatcggcacctatgcgttctatggctgcacctatcttacc
tcggtgaccatcggaaacaatgtcaccagcgtcggtagtagtgcgtttcaggactgcagc
gctctgacctcggtaaccatccctgacagcgtcaccaccattgatgccagtgcgttccgc
gactgcaccgcccttacttcggtgatcatccctgacagcgtcaccactatcggcagcagt
gtgttccgtgactgcagcgctctgacctcggttaccataggaaacaatgtcaccaccatc
ggcagcagtatgttccgcgactgcaccgcccttacctcggtgatgttcacgggcaatgct
cctgattctgtgagcagcagctgggcgtctggatgtcccgacctggtggtgtactactac
gaaagtgccaccggcttcaccacaccgacgtggaacggcgtcgcctgttacccgctgaca
gcggccccggtggcggacttcgaggccgacgtgacatcaggagtcgggcctatgattgtg
aatttcaccgatctgtccaccagatcgccggatacatgggaatgggactttaataatgac
ggaactgtggactcaactgagcagaacccctcgtatacgtatacttcagccggtacttac
actgtcaaccttacggttgcaaatgcaaacggaaccgattccgaggcaaagactgattac
atcacagtatccgaaccatctacgcctgcagaaccggttgctgctttcactgctgatgta
attgccggaactgctcctctaacagttaactttaccgaccagtccacaggttcacctact
gcctgggcctgggactttgacaacgacggaaacgtggactctactgagcagaacccctca
catacttattctgcagccggaaattacaccgccaatcttactgtagaaaatgctgccggg
atggactttgagttaaaaacggattacatcgaagtttccgaagcttccggatcaaccgtt
acactctatttcgatcctgaaagttcctcagttgcagaaaacgaatctactgaaataagt
atccttgccagtaatttccctgcagggttttcaggttacaacctgaccgttattatcgac
gacccggctgttgccgagataatcgacatcgagtatccctcatgggctctgattactgaa
aactcttccctaccagggacttctatctacctgaaggctgttgacggggaagataccgtg
caggtaggagcagcagatgttgtacttgcaactctcactgtttctggaaaggagaaagga
tctgctaacctttctataggagtttcccgtctggatgacgactcaggaaatgtaatcgag
ccagcccttttagccggaacaattgaagtaactcttctgtccccactgccggatcaggag
tatgctcctaaggaccttgacggggacgggctctatgaagacctcaccggaaacggggag
ttcagtttcgtggatatagtggcttacttccacaacatggactggatagaagaaaacatg
ccggtggagtacttcgacttcaacggaaacggaaggatagactttgatgatgtagtggat
atgtttgcaatgatataa
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