Methanosarcina siciliae C2J: MSSAC_3217
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Entry
MSSAC_3217 CDS
T03863
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
msj
Methanosarcina siciliae C2J
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msj03000
]
MSSAC_3217
Transcription factors [BR:
msj03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSSAC_3217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
HTH_11
MerR
MerR_1
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AKB37807
UniProt:
A0A0E3PQZ1
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All DBs
Position
3982502..3983488
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AA seq
328 aa
AA seq
DB search
MTKEVLIHQIIDVLSRAGFALSDRCNIRPRSFDVAARKDETLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQMLEDSVIYMRYDILALNVQTLYDYFVENVKPLVSAAP
GGLYVSIEGDLLKKARTGQAMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFG
VELARPIDILKSCGSRKSRKKAEPEKEEPQVKHNVLLPEDLILNMISMLGYDVLPTAQAP
FKAISRDESSVILTGVSEFNTTVIKRAHLMSSISCITETQSVFIINGRSKLKSVENTVLI
EKKELDKIGDSQELIEFIDERKETHSGA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaggttctcatacatcaaattattgatgtattgtcgcgtgcgggttttgca
ctttctgaccgatgtaatatacgtcccaggagctttgacgttgccgcgcgcaaagatgaa
acactactactttgcaaggttttatttaatattgacggtctgaacgaagaaaccgccagg
gagatgaaatatcttgctgagtatctcggaggttccgctatcgttgttggagccaagaca
agggatcagatgcttgaagatagtgtcatctacatgcgctatgatatccttgctctgaac
gtccagactctctatgactactttgttgaaaatgtcaagcctctggtttcagcagctccc
ggcgggctttatgtctcaatagaaggagatctcctgaagaaggcgaggacaggacaggcc
atgtccctcgggaccctggcttccatggtaggggtttcgaggaggactatcagcaaatat
gaagaagaaggcatggacgcatccatagatgtcgtgctccagctcgaggatattttcgga
gtcgaactggcgaggcccatagatattctgaagtcctgcggaagcagaaaatccaggaag
aaagcagagcctgaaaaggaagagccccaggtaaaacataacgtgcttttgcctgaagac
cttattctcaatatgatttcaatgctaggatacgacgtacttccaacagcccaggcccca
ttcaaagctatctcccgggacgagtcttcagtcatccttacaggtgtcagcgagttcaac
acaaccgtaatcaaaagggctcatctgatgagcagcatttcctgcattacggaaactcag
tccgtgttcatcattaacggacgttccaagctgaagtccgttgaaaatacggtgctgatc
gaaaagaaagaacttgacaagatcggtgattcgcaggaactcatcgagttcatagatgag
cgcaaggaaacacatagtggtgcataa
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integrated database retrieval system
