Methanosarcina siciliae C2J: MSSAC_3607
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Entry
MSSAC_3607 CDS
T03863
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSSAC_3607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msj03021
]
MSSAC_3607
Transcription machinery [BR:
msj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSSAC_3607
Prokaryotic type
Archaeal type
TFE
MSSAC_3607
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HVO_2753_ZBP
RepL
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AKB38197
UniProt:
A0A0E3PTD1
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All DBs
Position
4445761..4446216
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AA seq
151 aa
AA seq
DB search
MSLVGEEGLKMIEEMPEGEVTDEEIAAKTGVLLNTVRRTLFILYENKFAIVVRERDSNSG
WLTYLWHLDFSDIEHQLMREKKKLLRNLKTRLEFEENNVFYVCPQGCVRLLFDEATETEF
LCPMCGEDLVYYDNSQFIGVLKKRVEALSSA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtaggggaagaagggcttaaaatgatagaagagatgcccgaaggcgaagtc
acggatgaagaaattgcggcaaagaccggagttctgctgaataccgtgcgaagaaccctc
ttcatactttacgaaaacaaatttgcaatcgttgtaagggaaagagattcaaacagcgga
tggctgacttatctctggcatctggacttttccgacatagagcaccagctcatgagggaa
aagaaaaagctgctcaggaacctgaaaacccgtcttgaatttgaggaaaataacgttttt
tatgtctgtccgcagggctgtgttcgccttctttttgacgaagcaaccgaaacggaattt
ctctgtcccatgtgcggtgaagacctggtctattacgataattcccagtttataggcgtc
ctgaagaagcgtgtggaagccctgagttccgcgtaa
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