Methanosarcina siciliae C2J: MSSAC_3798
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Entry
MSSAC_3798 CDS
T03863
Name
(GenBank) Deoxyribodipyrimidine photolyase, type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
msj
Methanosarcina siciliae C2J
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msj03400
]
MSSAC_3798
Enzymes [BR:
msj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MSSAC_3798
DNA repair and recombination proteins [BR:
msj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MSSAC_3798
Prokaryotic type
MSSAC_3798
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKB38388
UniProt:
A0A0E3PSF7
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Position
4665796..4667184
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AA seq
462 aa
AA seq
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MNPKRIRTLKPGKSGGGPVAYWMSRDQRVEDNWALLFARVIAREADVPVVVVFCLTEGFL
GAGRRHYEFMLKGLQELEGALSRRKIPFYFLRGDAGQKIPEFVKEYDVGTLITDFSPLRI
KAEWVEKIIPEIEIPFFEVDAHNVVPCWEASPKQEYAAHTFRPKLYGHLSEFLEEFPELE
PNSESLKIRSGTGIPGILSRAQETGIKALLPEEISDKNKDLLFEPDHFEPGEKAARKVME
SFLAERLDSYNTLRNDPTKNVLSNLSPYLHFGQISAQSVVLEVEKTKNDPESKKDFLDEI
LVWKEIADNFCYYNPEYDSSESFPDWAKKSLNAHRNDRRKYIYTLEEFEAAKTHDPLWNA
SQIELLRTGKMHSYMRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWS
IGGVHDRAWKEREVTGKIRYMSYEGCKRKFDVKLYIEKYSAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaaacgcatccggactctcaaaccggggaaatcggggggagggcctgttgct
tactggatgagccgcgaccagagggttgaggataactgggccctgctctttgcgcgggta
atagcacgggaagcagatgtccctgtagttgtggttttctgcctgaccgaagggtttctg
ggagctgggagaagacattatgaattcatgctcaaagggctgcaggaacttgagggagcc
ctttcccggagaaagattcccttctactttctacgaggagacgcggggcaaaaaatccct
gagtttgtaaaagagtatgatgtagggactctaattactgatttcagtccgcttcgcata
aaggctgaatgggtagagaaaattattcctgaaatcgaaattccgttttttgaggttgat
gcccacaatgtggtgccctgctgggaagcttctccaaaacaggagtatgcggcgcatact
tttcgtccgaaactctatgggcacctctccgaatttctggaggaatttccggaacttgag
ccaaactcagaatctttgaaaatccgatcagggaccggtattccgggaattttatcccgg
gcacaggaaaccggaataaaagccctgcttccggaggaaatctccgacaaaaataaggat
ttgctctttgagcccgatcatttcgaacccggagaaaaagctgctaggaaggtaatggag
agttttcttgcagagcggcttgattcttacaacacgttgcgtaacgaccctacaaagaac
gtactctcaaacctttccccttaccttcatttcgggcaaatctcagcgcaaagtgtggtg
cttgaagtggaaaaaacaaaaaatgacccagaatcaaagaaagatttcctggacgagatc
cttgtatggaaagagattgcggacaacttctgttattacaaccccgaatatgatagctct
gagagttttcccgactgggcaaagaagtccctgaatgcccaccggaatgaccggagaaag
tatatttacacccttgaggagttcgaggccgcaaagacgcatgatccactctggaatgca
agccagattgaactgctccgtaccgggaagatgcacagctatatgcggatgtactgggca
aaaaagattcttgaatggagcgaatctcccgaaaaagcccttgaaattgcaatctgcctg
aacgacaggtatgagctggacggaagggaccccaatggttatgctggaattgcctggagt
atcggaggcgtccatgaccgggcctggaaggaaagagaagtaacaggaaaaatccgatat
atgagttatgagggctgcaaaagaaaattcgacgtcaaattatatattgaaaaatattca
gctctgtag
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