Methanosarcina siciliae C2J: MSSAC_4026
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Entry
MSSAC_4026 CDS
T03863
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSSAC_4026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msj03000
]
MSSAC_4026
03021 Transcription machinery [BR:
msj03021
]
MSSAC_4026
Transcription factors [BR:
msj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MSSAC_4026
Transcription machinery [BR:
msj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MSSAC_4026
RNA polymerase III system
TFIIIB
MSSAC_4026
RNA polymerase I system
SL1/TIF-1B
MSSAC_4026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
AKB38616
UniProt:
A0A0E3LE92
LinkDB
All DBs
Position
complement(4953114..4953665)
Genome browser
AA seq
183 aa
AA seq
DB search
MSESSIKIENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCERGVEVVRQQLDNM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctagcattaaaattgaaaacgtggtcgcatccaccaaactcgctgaagag
tttgatttaactgtgattgaatccgagttcgaaggcgccgagtacaacaagcagaagttc
ccggggctcgtctacagagtttcggaccccaaagctgctttcctggtctttacttccgga
aaggttgtctgcacaggagcaaaaaacgttgctgacgtacatacagttatcggcaacatg
gcaaaaaagctgaacagcatcgggatcaagacaatggaaaacccgcagattactgtccag
aatatagttgcctcagcagacctgcacaccatccttaacctcaacgcaattgcaatcggg
cttgggcttgaaaatatcgaatacgaacccgagcagttcccggggcttgtgtacaggatc
gatgagcccaaggtagttgtccttattttcagttccggaaaactggtagttacaggcgga
aaatcccctgaagactgtgaaaggggtgtagaagtagtccgtcagcagctcgataacatg
ggacttttataa
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