KEGG   Methanosarcina siciliae C2J: MSSAC_4026
Entry
MSSAC_4026        CDS       T03863                                 
Name
(GenBank) TATA-box binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
msj  Methanosarcina siciliae C2J
Pathway
msj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSSAC_4026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msj03000]
    MSSAC_4026
   03021 Transcription machinery [BR:msj03021]
    MSSAC_4026
Transcription factors [BR:msj03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    MSSAC_4026
Transcription machinery [BR:msj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MSSAC_4026
  RNA polymerase III system
    TFIIIB
     MSSAC_4026
  RNA polymerase I system
    SL1/TIF-1B
     MSSAC_4026
SSDB
Motif
Pfam: TBP DUF3378 RTT107_BRCT_5
Other DBs
NCBI-ProteinID: AKB38616
UniProt: A0A0E3LE92
LinkDB
Position
complement(4953114..4953665)
AA seq 183 aa
MSESSIKIENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCERGVEVVRQQLDNM
GLL
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagcgaatctagcattaaaattgaaaacgtggtcgcatccaccaaactcgctgaagag
tttgatttaactgtgattgaatccgagttcgaaggcgccgagtacaacaagcagaagttc
ccggggctcgtctacagagtttcggaccccaaagctgctttcctggtctttacttccgga
aaggttgtctgcacaggagcaaaaaacgttgctgacgtacatacagttatcggcaacatg
gcaaaaaagctgaacagcatcgggatcaagacaatggaaaacccgcagattactgtccag
aatatagttgcctcagcagacctgcacaccatccttaacctcaacgcaattgcaatcggg
cttgggcttgaaaatatcgaatacgaacccgagcagttcccggggcttgtgtacaggatc
gatgagcccaaggtagttgtccttattttcagttccggaaaactggtagttacaggcgga
aaatcccctgaagactgtgaaaggggtgtagaagtagtccgtcagcagctcgataacatg
ggacttttataa

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