KEGG   Methanosarcina siciliae C2J: MSSAC_4227
Entry
MSSAC_4227        CDS       T03863                                 
Name
(GenBank) Cell division protein FtsH
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
msj  Methanosarcina siciliae C2J
Pathway
msj04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:msj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MSSAC_4227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msj03019]
    MSSAC_4227
   03009 Ribosome biogenesis [BR:msj03009]
    MSSAC_4227
   04131 Membrane trafficking [BR:msj04131]
    MSSAC_4227
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msj04147]
    MSSAC_4227
Messenger RNA biogenesis [BR:msj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     MSSAC_4227
Ribosome biogenesis [BR:msj03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    MSSAC_4227
Membrane trafficking [BR:msj04131]
 SNARE
  SNARE associated proteins
   Others
    MSSAC_4227
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    MSSAC_4227
Exosome [BR:msj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSSAC_4227
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 CDC48_2 RuvB_N AAA_5 AAA_2 TIP49 AAA_14 AAA_22 AAA_33 nSTAND3 AAA_17 AAA_28 Mg_chelatase Sigma54_activat ABC_tran AAA_7 NPHP3_N AAA_3 IstB_IS21 RNA_helicase AAA_18 Vps4_C Zeta_toxin DUF815 NACHT AAA_24 TsaE ATP-synt_ab Parvo_NS1 AAA_lid_PRS2_C NB-ARC PhoH AAA_19 bpMoxR AAA_30 Sigma54_activ_2 DUF5906 SLFN-g3_helicase AAA_11
Other DBs
NCBI-ProteinID: AKB38817
UniProt: A0A0E3PU02
LinkDB
Position
5212904..5215162
AA seq 752 aa
MTEEMNLRVAEAYHKDVGRGIARIDTRLMQEMDLVSGDIIEISGRSKTYAIVWPNVERGQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTEIVIKEKSIEEIKTPEGISYEDIGG
LRRELQLVREMIELPMRHPELFQKLGIEPPKGVLLHGPPGTGKTMIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFDEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVVAQL
LSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRRQILLIHTRGM
PLEDEVSLGEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEEIPQEIIDNLVVTK
EDFREALKNIEPSAMREVYVEVPHVGWDDIGGLEKAKQELIESVEWPLKYPEMFKTVNIK
PPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAIRETFRKAKQA
APTVIFFDEIDSIAPERSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDS
ALLRPGRFDRLIYIKPPGKEGREKIFEIHTKGKPLAEDVKLTELAEMTEGYVGADIEGIC
REAAMLALREIVTPGIDRKSIQEKAGEVRLSKRHFERAIRRVKPTTSRETLSAYEKSAEL
FARYATEFEEESSEAKEEKEIEGKEVPNFPKV
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgactgaagaaatgaatctgagagtagctgaggcttatcataaagatgtaggcagggga
attgcaagaattgatacccgtctgatgcaggaaatggatcttgtgagcggagatattatt
gaaatctcaggcagatccaagacttatgcaattgtctggcctaacgtcgagcgcggacag
gagaacaggatcagaatagacggaaacctgcgcagcaatgcaaaggtcggaattgatgac
agagttactatccagaaggtccaggcaaaacatgctcaaagggtcacacttgctccatcc
cagcctgtcagacttgtaggcggagcccattacatcctgagaataattgagggcagacct
ctgaacaaaggtcagcagatcagggttgaaaccgtaaataatcccctgaccttcgtcgtg
gcatccacaaggcctgcagggccggtcgttgtcaccaaagacactgaaattgttatcaag
gaaaaatcaatcgaagaaatcaagactccggaagggatctcgtatgaggacatcgggggg
ctcaggcgggaactccagcttgtaagggaaatgatcgagttgccaatgagacaccctgaa
ctcttccagaagctgggaatcgagcctcccaaaggtgtcctgcttcacgggccgccggga
acgggcaagaccatgattgcaaaagcggtagcaagtgaaaccgacgccaatttcatcaca
atcagcggccctgaaatcgtttccaaatattacggagaaagtgaacagaagctccgggag
atcttcgacgaagctgagaaggatgcaccttccattatcttcatagacgaaattgactcc
atcgctcccaaacgcggtgaagtcaccggagaaatggaaagaagggtggtggctcagctc
ctctccctgatggacgggcttaagtccagaggtgaagtcgttgtcatagctgccacaaat
cgtccgaactccattgacgaagccctccgccgtggcggcaggtttgacagggaaattgaa
atagggattcctgaccggaacggcaggagacagatcctcctgatccacaccagaggcatg
cctcttgaagatgaagtgagccttggtgagatcgcagatgtaacccacggttttgtggga
gccgacctctcctctctctgtaaggaagccgctatgcatgccctcagaaggatcacccct
gaaatcgatatagaagaggagatcccacaggaaatcattgacaacctggtggttacgaag
gaagacttcagagaagccctgaagaatatcgagccttcagccatgcgagaagtctatgtt
gaagttccgcatgtgggatgggatgatataggcgggcttgaaaaagcaaaacaggagctt
atcgagtccgtggaatggcctctcaagtatcccgaaatgttcaagactgtcaatataaag
cctccgagaggagtcctgctcttcggacctccgggtacggggaagactttgcttgcaaaa
gctgttgcaagtgagagtgaagcaaactttatcagtatcaaaggccccgaacttctcagt
aaatatgtgggtgaatccgagcgtgcgatcagggagacattcaggaaagcaaagcaggct
gcaccgacagtaattttctttgatgagatcgactccattgcccctgaaaggagctctgtt
tccgacactcacgtctccgaaagggtggtaagccagatcctgacagaacttgacggggta
gaggaactcaaggatgtgatcatagttgctgctacaaacaggccggatatggtagactct
gccctcctcagacccggccgttttgacaggctcatttacataaagcctcccggaaaagaa
ggcagagagaagatctttgagatccacacaaaaggaaagcccctcgcagaggatgtaaaa
ctcactgaactggctgaaatgaccgaagggtatgtgggtgcggatatcgaaggcatctgc
agggaagcggcaatgctcgccctcagggaaatagtcactccgggcattgaccggaagagc
attcaggaaaaagccggagaagttcgcctttcaaaaaggcattttgaaagggcaatccgc
cgtgtaaagcccacaacatccagagaaactctgagcgcttacgaaaagagtgcagagctc
tttgccaggtatgcaaccgagtttgaggaagaatcttccgaagcaaaagaagaaaaggaa
atagagggaaaagaagtcccgaattttcctaaggtctga

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