Methanosarcina siciliae C2J: MSSAC_4227
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Entry
MSSAC_4227 CDS
T03863
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msj
Methanosarcina siciliae C2J
Pathway
msj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSSAC_4227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msj03019
]
MSSAC_4227
03009 Ribosome biogenesis [BR:
msj03009
]
MSSAC_4227
04131 Membrane trafficking [BR:
msj04131
]
MSSAC_4227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msj04147
]
MSSAC_4227
Messenger RNA biogenesis [BR:
msj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSSAC_4227
Ribosome biogenesis [BR:
msj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSSAC_4227
Membrane trafficking [BR:
msj04131
]
SNARE
SNARE associated proteins
Others
MSSAC_4227
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSSAC_4227
Exosome [BR:
msj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSSAC_4227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_22
AAA_33
nSTAND3
AAA_17
AAA_28
Mg_chelatase
Sigma54_activat
ABC_tran
AAA_7
NPHP3_N
AAA_3
IstB_IS21
RNA_helicase
AAA_18
Vps4_C
Zeta_toxin
DUF815
NACHT
AAA_24
TsaE
ATP-synt_ab
Parvo_NS1
AAA_lid_PRS2_C
NB-ARC
PhoH
AAA_19
bpMoxR
AAA_30
Sigma54_activ_2
DUF5906
SLFN-g3_helicase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKB38817
UniProt:
A0A0E3PU02
LinkDB
All DBs
Position
5212904..5215162
Genome browser
AA seq
752 aa
AA seq
DB search
MTEEMNLRVAEAYHKDVGRGIARIDTRLMQEMDLVSGDIIEISGRSKTYAIVWPNVERGQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKHAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTEIVIKEKSIEEIKTPEGISYEDIGG
LRRELQLVREMIELPMRHPELFQKLGIEPPKGVLLHGPPGTGKTMIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFDEAEKDAPSIIFIDEIDSIAPKRGEVTGEMERRVVAQL
LSLMDGLKSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRRQILLIHTRGM
PLEDEVSLGEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEEIPQEIIDNLVVTK
EDFREALKNIEPSAMREVYVEVPHVGWDDIGGLEKAKQELIESVEWPLKYPEMFKTVNIK
PPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAIRETFRKAKQA
APTVIFFDEIDSIAPERSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDS
ALLRPGRFDRLIYIKPPGKEGREKIFEIHTKGKPLAEDVKLTELAEMTEGYVGADIEGIC
REAAMLALREIVTPGIDRKSIQEKAGEVRLSKRHFERAIRRVKPTTSRETLSAYEKSAEL
FARYATEFEEESSEAKEEKEIEGKEVPNFPKV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaatgaatctgagagtagctgaggcttatcataaagatgtaggcagggga
attgcaagaattgatacccgtctgatgcaggaaatggatcttgtgagcggagatattatt
gaaatctcaggcagatccaagacttatgcaattgtctggcctaacgtcgagcgcggacag
gagaacaggatcagaatagacggaaacctgcgcagcaatgcaaaggtcggaattgatgac
agagttactatccagaaggtccaggcaaaacatgctcaaagggtcacacttgctccatcc
cagcctgtcagacttgtaggcggagcccattacatcctgagaataattgagggcagacct
ctgaacaaaggtcagcagatcagggttgaaaccgtaaataatcccctgaccttcgtcgtg
gcatccacaaggcctgcagggccggtcgttgtcaccaaagacactgaaattgttatcaag
gaaaaatcaatcgaagaaatcaagactccggaagggatctcgtatgaggacatcgggggg
ctcaggcgggaactccagcttgtaagggaaatgatcgagttgccaatgagacaccctgaa
ctcttccagaagctgggaatcgagcctcccaaaggtgtcctgcttcacgggccgccggga
acgggcaagaccatgattgcaaaagcggtagcaagtgaaaccgacgccaatttcatcaca
atcagcggccctgaaatcgtttccaaatattacggagaaagtgaacagaagctccgggag
atcttcgacgaagctgagaaggatgcaccttccattatcttcatagacgaaattgactcc
atcgctcccaaacgcggtgaagtcaccggagaaatggaaagaagggtggtggctcagctc
ctctccctgatggacgggcttaagtccagaggtgaagtcgttgtcatagctgccacaaat
cgtccgaactccattgacgaagccctccgccgtggcggcaggtttgacagggaaattgaa
atagggattcctgaccggaacggcaggagacagatcctcctgatccacaccagaggcatg
cctcttgaagatgaagtgagccttggtgagatcgcagatgtaacccacggttttgtggga
gccgacctctcctctctctgtaaggaagccgctatgcatgccctcagaaggatcacccct
gaaatcgatatagaagaggagatcccacaggaaatcattgacaacctggtggttacgaag
gaagacttcagagaagccctgaagaatatcgagccttcagccatgcgagaagtctatgtt
gaagttccgcatgtgggatgggatgatataggcgggcttgaaaaagcaaaacaggagctt
atcgagtccgtggaatggcctctcaagtatcccgaaatgttcaagactgtcaatataaag
cctccgagaggagtcctgctcttcggacctccgggtacggggaagactttgcttgcaaaa
gctgttgcaagtgagagtgaagcaaactttatcagtatcaaaggccccgaacttctcagt
aaatatgtgggtgaatccgagcgtgcgatcagggagacattcaggaaagcaaagcaggct
gcaccgacagtaattttctttgatgagatcgactccattgcccctgaaaggagctctgtt
tccgacactcacgtctccgaaagggtggtaagccagatcctgacagaacttgacggggta
gaggaactcaaggatgtgatcatagttgctgctacaaacaggccggatatggtagactct
gccctcctcagacccggccgttttgacaggctcatttacataaagcctcccggaaaagaa
ggcagagagaagatctttgagatccacacaaaaggaaagcccctcgcagaggatgtaaaa
ctcactgaactggctgaaatgaccgaagggtatgtgggtgcggatatcgaaggcatctgc
agggaagcggcaatgctcgccctcagggaaatagtcactccgggcattgaccggaagagc
attcaggaaaaagccggagaagttcgcctttcaaaaaggcattttgaaagggcaatccgc
cgtgtaaagcccacaacatccagagaaactctgagcgcttacgaaaagagtgcagagctc
tttgccaggtatgcaaccgagtttgaggaagaatcttccgaagcaaaagaagaaaaggaa
atagagggaaaagaagtcccgaattttcctaaggtctga
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