Mycoplasma suis KI3806: MSUIS_03470
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Entry
MSUIS_03470 CDS
T01442
Symbol
polC
Name
(GenBank) DNA polymerase III, polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
msk
Mycoplasma suis KI3806
Pathway
msk03030
DNA replication
msk03430
Mismatch repair
msk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSUIS_03470 (polC)
03430 Mismatch repair
MSUIS_03470 (polC)
03440 Homologous recombination
MSUIS_03470 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msk03032
]
MSUIS_03470 (polC)
03400 DNA repair and recombination proteins [BR:
msk03400
]
MSUIS_03470 (polC)
Enzymes [BR:
msk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSUIS_03470 (polC)
DNA replication proteins [BR:
msk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSUIS_03470 (polC)
DNA repair and recombination proteins [BR:
msk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSUIS_03470 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
RNase_H_2
HHH_6
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CBZ40440
UniProt:
F0V3L8
LinkDB
All DBs
Position
301334..305650
Genome browser
AA seq
1438 aa
AA seq
DB search
MAVKSKKTLTSKFKSLFVKKLLLLTEEEFKKLLERAEISGSFSSSKDRFDVNVTYFDEPL
FSELIKFFNFSSSVCFIHVKLHYLYNTSAIYRLVSEWFKYFSFNSEEREKFFLKENHIVF
EFPQLILKAENLMQEKYFSFHLDHLKSFLEYVFEYHKIWISFVKVDSVPTTPTISIPENR
FSFRENEGEFIPPGQDRNIRKGLYKLYFFEEIENYSYRKKKAYQVGFTNLKEHYFLILGR
LVDDKKRDLILEKLKIGKWFQIEFKLDLENLSKTKTLANYDGWLINCLEAESPDETQFTD
NSEKKAFPLNVYTKYSSFDGLFTSAEWAKLSAECGYDVLALTDFNNVHSFPESEKSVKKN
KLKALYGAEFEVVSSDLQIIKNVENLKPEDDIVFSIFDLETTGLNPIFDEIIEIFVLKYS
SGTVIDHYYSLIRCNKKLRKEIINLTHITEEKLNMSGRDKLTVLQEVRDFVSGTVLIAHN
GIDFDFPFLNSELRKSGLEPLDNPILDTLRLCKALEEGKKSKSYSLFAIAKKMSINVVEQ
ELHNSEYDTRCLAKMWEFWSQQLIDLSLDPYTYDGLVNLNSSFDKDKLLRNYFGNNVIIF
AKNQKGLKSLYELVSIAHTEHFVDKPRLKWDAIETRRENLIVLSSPTNSALVNAVLNDEF
DTFKKEGEKFDYISLPPPSNFSHEISRGFFEDGEVETLLKTFYEWADNCQFKLIANYCLK
YQDFKEVEQYKVLVHAKSIGGKRHYLYSSKHGNDVLPDYSWRTTERLIAEYDFLSLSEKE
KEDLFFTYRYELANSVSPDIFVNKSELAIPKIPGALENIKEYIHRKLTAKYGKKLDKQIQ
ATINRELTGIVENGYESVYWCAHLLVQRSKSEGFLVGSRGSVGSSFLAHALEISDVNPLP
PHYYCSQCSYFLMCTNFRESGFDLETRRCPQCASELSSDGQNIPFETFLGLERNKIPDID
LNFSGQYQQKAHNFLRELFGKEHTFRAGTISAIAEKTSFALAKNFLQDNQIDFNKGHLHW
LSYRLTDVKRTTGQHPGGIIVIPRGESIYNYTPVNFPANDIESEWLTTHFDKDTFKDSLF
KFDILGQDDPTILALLSNFTGVDLEKIPFKNERLLKMFSDISVLEIPQNKLELLGEVVGT
LGLPEFGTEKTREIMKACRSKIKHFSDLIRISGISHGKNVWKNNIEKLISSQKLSLNEVI
TCRDDIMNYLLEKKIDIQNAFKITESVRRGGGIPPENLPLLRKAGVPEWYIECANKITYI
FPKAHATAYVLMCWKIAYFKLEYPVDFYAAYLTITNRHFDVETLTTNDLATIKRKYQEGK
MLIKSKKSGENIEKTKYLVIIYEVALEMISRGITFKMVDLNESLASTFKPDRKNKTILLP
FSSIARLGAITAKQLEDERNRGGKFLNREDLEKRVKLNVSILKLLEQLKIIEPKVKSS
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaagtctaaaaaaacattgacttctaaatttaaatcccttttcgttaagaag
ttattacttcttacagaggaggaatttaaaaaattactcgaaagagctgagataagtgga
tctttttcttcctctaaagatcgatttgatgtaaatgtaacttattttgatgaacctcta
tttagtgaattaataaagttcttcaatttctcttcctctgtttgctttattcacgtgaaa
ttgcactatctctacaatactagtgcaatttacagactagtatctgaatgatttaaatat
ttttcttttaactcggaagaacgagaaaagttcttcctaaaagaaaatcacatagttttt
gaattccctcagttgattctcaaagctgagaatcttatgcaagaaaaatatttttctttt
cacttagatcatctaaaaagttttcttgaatatgtctttgagtatcacaaaatttgaatc
tcctttgtaaaagtagattcagttccaacaaccccaacaatatctattccggaaaataga
ttttcttttagagagaacgaaggagagtttattcctccgggacaagatagaaatataaga
aaaggcctttataagctttacttcttcgaagaaatagagaattattcttatagaaagaaa
aaagcctaccaagtaggctttactaacctaaaagaacattatttcctaattctaggaaga
ctagtagatgacaagaagagagatttaattctcgaaaagctaaaaattgggaaatgattc
caaattgagttcaagttagacttagagaatctctctaagactaaaacacttgccaattat
gacggatgactaattaattgtttagaggctgagtctccagatgagactcagttcacagac
aattcagaaaagaaagcttttcctctgaatgtatatactaagtactcaagttttgatggt
ttatttacatcagctgagtgagctaaattatccgcagaatgcggatatgatgtactagct
ctcacagactttaataatgttcactctttcccagaatctgaaaagagtgtaaagaaaaat
aaattaaaggctctttatggagctgagtttgaagttgtttcttcagacttacaaataatt
aagaatgtcgaaaatttaaaaccagaagacgatatcgtcttctcaatttttgacctagaa
acaacaggtctaaatcctatatttgatgaaataatagaaatatttgttctcaaatacagt
tctggaactgtaatagatcactattacagccttattagatgtaataagaagttaagaaaa
gaaattattaacttaactcacattactgaagaaaaactaaatatgtccggaagagataag
ttaacagttcttcaggaagtaagagattttgtttctggaactgtattaatagctcacaat
ggaatagactttgactttccatttctgaactcagaattgagaaagtcaggacttgagcca
ctagataaccctatattagatactctaaggctctgcaaagcattagaagaaggaaagaag
tctaagtcttattctctttttgctattgcaaaaaagatgtcaattaatgttgtggagcag
gagctccacaactcagaatatgacactagatgtttagcaaaaatgtgagagttctgatct
caacaacttattgatctttcactagacccatatacatatgatggtctagtgaaccttaat
tcttcatttgacaaagataaattacttagaaattattttggaaataatgtaattattttt
gcaaaaaatcaaaagggattgaaatctctttatgaattagtttctatagcccatactgaa
cactttgtggataaaccaagacttaagtgagatgctatagaaactagaagagaaaactta
atagtcttatcttctcctacaaatagtgcattagtaaatgcagtattaaatgatgaattt
gacaccttcaaaaaagaaggcgagaaatttgactatataagcttgccccctccttctaat
ttctctcacgaaataagtagggggttttttgaagatggggaagtagagactcttctaaaa
accttttatgagtgagcagataattgtcaatttaaattaattgccaattactgcctaaaa
tatcaagactttaaagaagttgaacaatacaaagtacttgttcatgctaagagtataggt
ggcaagagacactacctatactcaagtaaacatggtaatgatgtattaccagattactct
tggagaactacagaaagacttattgcagaatatgacttcctatctctttccgagaaagag
aaggaagatctattcttcacttatagatatgaattagctaatagtgttagtccagatatt
tttgttaataagagtgaattagctattccaaaaatacctggagctctcgagaatataaaa
gaatatattcacagaaaattaacagctaaatatggaaagaagttggataagcaaatacaa
gcgacaataaatagagagcttacaggtattgttgaaaacggatatgagtcagtttattgg
tgtgcacaccttttagttcaaaggtctaagtctgaaggatttttagtaggatcaagagga
tctgttggatcctctttcctagcacatgcactagaaattagtgatgttaatccactacca
cctcattactactgtagtcagtgttcttatttcttgatgtgcactaatttcagagagtca
ggatttgatctagaaactagaagatgtcctcaatgtgcttctgaattatcctctgatggc
cagaatattccattcgaaacattcttagggctagaacgaaataagattccagatattgac
cttaacttttctggtcaatatcaacaaaaagcccataacttcttgagagagttatttgga
aaagaacatactttccgagccggaactatttctgctattgcagaaaaaacatctttcgca
ctagctaaaaatttcttacaagataatcaaatagatttcaataagggacaccttcactga
ttgtcctatagattaactgatgtaaaaagaactacaggacaacatcctggaggaataata
gttattcctcgcggagaatctatttacaactacacgccagttaattttccagcaaacgat
atagaaagtgagtggttaaccactcactttgataaggacacatttaaagactcactcttt
aagttcgatattctaggacaagatgatccaactattttggctctcttgtccaactttact
ggagtagatttggaaaaaattcctttcaagaatgaaagacttctaaaaatgtttagtgat
atttctgttctggaaataccacaaaacaaattagaactacttggagaagttgttggaact
ctgggacttccagagttcgggacagaaaaaactagagaaataatgaaagcttgcagaagt
aagataaaacatttctcagacttaataagaatttctggtattagccatggtaaaaatgtt
tgaaaaaacaatatagaaaaattaatttctagccaaaaattaagtctaaatgaggtaatt
acatgtcgggacgacatcatgaattacctactagagaaaaaaatagatattcaaaatgct
tttaaaataaccgaaagtgtgagaagaggaggaggaatccctcctgaaaatctaccttta
cttagaaaggctggagttccagaatgatatattgagtgtgcaaataagattacatatatt
ttccctaaggcccacgctacagcttatgtacttatgtgctgaaaaatagcttactttaag
ttagagtatcctgtagacttctatgcggcttatttaacaattacaaatagacactttgat
gtagagacacttacaacaaatgatttagctactataaagagaaaatatcaagagggaaaa
atgcttataaagagtaaaaagagtggagaaaatatagaaaaaactaaatacttagtaatt
atttatgaagtagccctagaaatgatttctaggggaattacatttaagatggttgattta
aatgagtcactcgcaagtacatttaagccagatagaaaaaataaaacaatattacttcca
ttctcttctattgctagattgggagctattacagctaaacagctagaagatgaacgaaat
agaggaggtaagttcttaaatagagaagacttagagaaaagagttaagttgaatgtaagt
attttgaagttacttgaacaactaaaaataatagaaccaaaagtaaaaagtagttaa
DBGET
integrated database retrieval system
