Mycoplasma suis KI3806: MSUIS_04210
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Entry
MSUIS_04210 CDS
T01442
Name
(GenBank) Metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msk
Mycoplasma suis KI3806
Pathway
msk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSUIS_04210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msk03019
]
MSUIS_04210
Messenger RNA biogenesis [BR:
msk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MSUIS_04210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
RNase_J_C
RMMBL
Motif
Other DBs
NCBI-ProteinID:
CBZ40514
UniProt:
F0V1I3
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All DBs
Position
359794..361644
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AA seq
616 aa
AA seq
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MVFHTVEQHIFECRKNKQKDPTFFYSIGGIEEIGKNCYCVEHLDEIVIMDFGIKFGNKLT
QPGVTGEIPNLDYLIENQKKIFGLLITHGHEDHIGGVPHLVNSLDIPVIYAPALAMELIK
KKLEENKIERLPKLEVYDPDTIIFTKHFAFDVFPVNHSIPDSFGFAISTPNGVVVFSGDF
RFDLKNKIDSKAFQRLISIGGRQVDLLLCESTAAAQPGFNESEATIIQELKNIISSSEGR
IIITFFASNLGRIEEIVKLASSAGRKIIVFGRSIESSLKCSQAVGILNSNELKNVFIPSS
EINTVPDKKILIICTGSQGEESSALNNISKGLHPIIQLKPSDDIIFSSNVIPGNKQAVNE
LVNRLYKSGCRLFLNSNECKIHASGHATKLEQQLFISLIAPSFLAPVHGEKKMLHDLKRN
ISELKIVPSENIFILKNGEKLKIFNRKVTKAEPEEHLQFKFPYYVMENKLTDHGRETLGA
RTKLATNGLLTVSMTVDLSTKKLFSISPVTTIGSLSFSLSAEILRDLGRMISKNTEELFN
NSKGGLSKEDIISSNSKIITDFFNKKGHKIPQILILLEETNSNELWENSISANTYSKPAP
AGTQSSEQQSNSSTTN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtttttcacacagtagaacaacacatattcgaatgtagaaaaaataagcaaaaggat
cctactttcttctattccattggaggaatagaagaaataggtaagaactgctactgtgta
gaacaccttgatgaaatagtcattatggactttggaatcaagttcggtaataagttaact
caaccaggtgttactggcgaaattccaaacttggattacttaattgaaaatcaaaagaaa
atatttggtcttttgataactcacggacacgaagaccacattgggggagttccacaccta
gtgaattctctagacatacctgttatatatgctccagctttagctatggaacttataaaa
aagaaactagaagaaaacaagattgaaagacttccgaaattggaagtctatgatccagac
acaataatattcacaaaacattttgcttttgatgttttcccagttaatcactcaattcca
gactcatttggatttgctatttcgactccaaatggagttgtagtatttagcggggacttc
agatttgacttaaagaacaagatagatagtaaagctttccaaagacttataagtattgga
ggaagacaagttgatcttcttctgtgtgaatccacagcagcagctcaacctggattcaat
gaaagcgaagcaactatcattcaagagctaaaaaatattatttcttcctccgagggaaga
ataataattactttctttgcttccaacttaggaagaatagaggaaatagttaagttagct
agttcggctggaagaaaaataatagtgtttggtagatctattgaaagtagcttaaaatgc
tctcaagcagttggaattcttaattccaatgaacttaaaaatgtatttattccttcttca
gaaataaatacagtaccagataaaaagatacttattatctgtactggttcccagggagaa
gaatcctcagcccttaataatatttctaagggtctacacccaataattcaactaaagcct
tcagatgatattattttctcttcaaatgtaattccagggaataaacaagcagttaatgaa
ttagtaaatagactttacaagtctggttgcagactattcttgaactcaaatgagtgcaag
attcacgcttctggtcacgcaactaaacttgaacaacaattatttatttccttaattgcg
ccttcattcttagctccagttcacggagaaaagaaaatgttacatgatcttaagagaaat
atctcagaactaaaaatagttccgagtgaaaatatttttattctgaagaatggagaaaaa
ttaaagatatttaatagaaaagtgactaaagctgaacctgaagaacatcttcaatttaag
ttcccttactatgtaatggaaaataaattgactgaccatggtagagaaacattgggggct
agaactaagttagcaaccaatgggttgttaactgtttctatgacagtagatctatcaact
aaaaaattattctctatttctccagtaacaactattggttctctctcattctccctatca
gctgaaattcttagagatttagggagaatgatttctaagaatacagaggaattatttaat
aacagtaaaggaggattatcaaaagaagatattatttcctctaactcaaagataattact
gatttcttcaataagaaaggacataagattcctcaaatactaatactattagaagaaact
aatagtaatgaattgtgagagaattctataagtgctaacacttacagtaagccagctcct
gcgggaactcaatcttctgagcaacaatccaattcttctactactaactag
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