Mycoplasma suis KI3806: MSUIS_08040
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Entry
MSUIS_08040 CDS
T01442
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msk
Mycoplasma suis KI3806
Pathway
msk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSUIS_08040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msk03019
]
MSUIS_08040
Messenger RNA biogenesis [BR:
msk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MSUIS_08040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
CBZ40897
UniProt:
F0V2L6
LinkDB
All DBs
Position
complement(700642..702318)
Genome browser
AA seq
558 aa
AA seq
DB search
MARLKYYSLGGQDEKFRFSGVLELNGDIFILNAGGSCVNTNLYEIDDVIPDYSSLIPLKP
KIRGLFIGVPKELNISSLPYFLDVFPEVPIFTNSFGESIIRDFLERFHEEGGKKYNPNIV
ALNLISEHAVPGSNDCKILPIKVAASLPNSLAWAFKFSGSDYVVFMDEFLMSSENVPCRE
NQLNFLFQNLKNKVSLLIVGTQSCATVPSFSLKVADNFSYLKKLTSRISTRLNVAAYKDD
WHTLFNLSRIARIYEYDLLIYPLKTSRMFNSFITENKLKNYSLSVSEETSRREGVVQIRI
ITGTHNTLYSNLRAINSGEVKDWEFLPTDVTVFMTSTFTERELEEISMINEIAHRGGEVL
KLPSTIVPYMAGTEDLKLLVNYLSPYHVIPVNGFYKDYVEFTKALTNVMNIDKIYFLENG
QYVNIEKKNVSITENPLQEIYVGNKKILDINRITIYERRLIAQSGVVLVSVRCNSKKNIV
SNPMVQMLSVFSDDFSKKDEVLLRIQTNLKQDISKYLQQNSEIENKGLKQSIRKSVYNSL
DPFIYKKPAVVSVISHIN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattaaagtattactccctagggggtcaagatgaaaagtttagattcagtgga
gtacttgaattaaatggagatattttcatcttgaatgctggaggaagttgtgtaaataca
aatctatatgaaatagatgatgtaatacctgattactcatctttaatcccattaaagcct
aagataagaggattatttattggagttcctaaggaactcaatatttcctctttaccttat
ttcttggatgtatttccagaagtccctatatttactaactctttcggagaatccataata
agggacttcttggaaagattccatgaagaaggaggcaaaaaatataaccctaatatagtt
gcacttaatttaattagtgaacatgcagtcccaggatcaaatgattgcaaaatattacct
attaaggtagcagcttcgcttcctaattctttagcctgagcttttaaattttcaggatca
gactatgttgtatttatggatgaatttttgatgtcctctgaaaatgttccttgcagagaa
aatcaattaaatttccttttccaaaaccttaaaaataaggtttctttacttatagttgga
actcaatcttgcgctactgttccttctttctcacttaaagtagcagataacttctcatat
ttaaagaaattaacttccagaataagcacaagactgaatgttgcagcttacaaagatgac
tgacatactctcttcaacttaagtagaatagctcgaatatatgagtatgacttactcata
tatccacttaaaacatcaagaatgtttaatagttttataactgaaaacaagttaaagaac
tactccctatcagttagtgaggaaacttccagaagagagggagtagttcaaataagaata
attactggaacacacaatactctttacagtaacttaagagctattaatagtggagaagta
aaagattgagaatttcttccaactgatgtaacagtatttatgacttctacatttactgaa
agagagttggaagaaatctcaatgataaatgaaattgcacatagaggaggagaagttctg
aaacttccctcaactatagttccctatatggcaggaactgaagatcttaagctccttgta
aattacttatctccatatcatgtcattccagttaatggcttttataaagactatgtggaa
tttacaaaagccttaactaatgtcatgaatatagataagatatatttcctagaaaacgga
caatatgtgaatatagaaaaaaagaatgtaagtattacagaaaatccgttacaggaaata
tatgtaggaaataaaaagatattagacataaatagaataactatctatgaacggagacta
atagctcaaagtggagtagtattagtctccgttagatgtaatagcaaaaaaaatatagta
agtaatcctatggtgcaaatgcttagtgtattctcagatgacttctccaagaaggatgaa
gtccttctgagaattcaaaccaatctaaaacaagatatttctaagtatttgcaacaaaat
tcagaaatagaaaataaaggattaaagcaatccattagaaaatctgtttataattctcta
gatcctttcatttacaagaaaccagcagtggtttctgtaatttcacacataaattag
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