KEGG   Methylocella silvestris: Msil_0263
Entry
Msil_0263         CDS       T00802                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
msl  Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:msl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msl03400]
    Msil_0263
Enzymes [BR:msl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Msil_0263
    5.6.2.6  RNA 3'-5' helicase
     Msil_0263
DNA repair and recombination proteins [BR:msl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Msil_0263
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: ACK49242
UniProt: B8EP04
LinkDB
Position
301653..304325
AA seq 890 aa
MTNSDLELPPRFRSWFADRGWTPRRHQLDLLDLAGVADALLIAPTGAGKTLAGFLPTLIE
LDRQKKREGLHTLYISPLKALAVDVHRNLEIPIAEMGLAVRVETRTGDTSAARRQRQRRD
PPDILIATPEQLALLLAGPDARTLFSSLRRVIFDELHAIAASKRGDLLCLGLSRLRRIAP
GLTATGLSATVRDPGELQRWLTAQTTPNATAALVVADRGAAPDLSILDTKEHLPWAGHSA
RHALGEIYAAIKGAKLTLVFVNTRAQAEYIFQELWRRNEDGLPIALHHGSLDVAQRRKVE
EAMASGRLKAVVCTSTLDLGVDWGDVDLVINVGAPKGASRLAQRIGRANHRLDEPSRAIL
VPANRFEVLECRAAVDAANEGAQDTAMARSGALDVLCQHILGMACADPFDAGELFAEIRS
AEPYARLSPEQFDAALNFVATGGYALKSYERFAKIKQTADGRWRIANGRVAQSYRLNVGT
IVEADLLKVRLVPGGAKPSASYTGPLRRGGRVLGEIEEYFIEMLAPQDTFLFGGEILRLQ
GVVENEAIVSRASADAPKIPSYAGGKFPLSTYLAMRVRRILATESSWDTLPGQVADWLDL
QRRRSALPPADRLLVESFPRGGRYYLALYPFEGRLAHTTLGMLLTRRMERAGLKPLGFVA
NDYALCIWSLTDVGALFETGALRLEDFLSEDMLGDDLEEWLEESALMKRTFRNCAIVSGL
IERNVLDRRKTGRQVKISTDLIYNVLRRFEPRHILLEAARADAATGLLDLERLAGLLLRA
RGRTIHKALARVSPLAVPILLEIGRETVYGEAQDETLAEAAQTLVDEVLADSAPGRPELA
NAGRLGNGRATPAAAPPARASVRPKGTPPDNAGLRAKKTSTSRRASGPRR
NT seq 2673 nt   +upstreamnt  +downstreamnt
gtgaccaattccgatctcgagttgccgccgcgcttccggtcctggttcgccgaccgaggc
tggacgccgcgccggcatcagctcgaccttctcgatctcgccggcgtcgccgacgctttg
ctgatcgcgccgacgggggccggcaagactctggccggatttcttccgaccctgatcgag
ctcgaccgccaaaagaagagggaggggctgcacaccctctatatctcgccgctgaaggcg
ctcgcggtcgacgtccatcgcaatcttgaaatcccgatcgcggagatgggccttgccgtc
agggttgagacgcgcaccggcgacacatcggcggcgcggcgccagcgccagcgccgggac
ccgcccgatattttgattgcgacgccggagcaattggccttgcttctcgccggcccggac
gcgcggactctgttttcgagccttcgccgtgtgatctttgacgaactccacgccatcgcc
gcctcgaaacgcggcgatctgctttgccttggcctttcgcgtctgagacgcatcgctcct
gggctgacggcgaccggcctgtcggcgacggtgcgcgatccgggggagttgcagcggtgg
ctaacggcgcagacgacgccgaacgccacagccgctttggtcgtcgccgaccggggcgcc
gcgccagacctctccattctcgacacgaaggagcatctgccgtgggcagggcacagcgcc
cgtcacgcgctcggcgaaatctacgcggcgatcaagggcgcaaaactaactctcgtcttc
gtcaatacacgcgcgcaggcggagtatatttttcaggagctttggcggcgcaacgaagat
ggtttgccgatcgccctgcatcacgggtcgctcgacgtcgcgcagcggcgcaaggtcgag
gaggcgatggcgtcgggcaggctgaaggccgtcgtctgcacgtcgacgctcgatcttggc
gtcgactggggcgatgtcgatcttgtcatcaatgtcggggcgccgaagggcgcgagccgc
cttgcgcagcgcatcggcagagccaatcacaggctggatgaaccgtcgcgcgccatcctc
gtgccggccaaccggtttgaagtgctggagtgccgcgccgccgtcgacgccgcaaatgaa
ggcgcgcaggatacggcgatggcgcgctccggcgcgctcgatgttttatgccagcatatt
ctcggcatggcttgcgccgaccctttcgacgcgggcgaactctttgcggagatacgctcg
gccgagccctatgcgcggctctcgccggaacaattcgacgccgccctgaactttgtcgcc
actggtggctacgcgctgaaaagctatgagcgcttcgccaagatcaagcagaccgcggat
ggacgctggcgcatcgccaatgggcgcgtcgcgcagagctaccggctcaatgtcgggacc
atcgtcgaggcggaccttctgaaggtgcggctcgttccgggcggagcaaaaccgtcggcg
agctacaccgggccgttgcggcgcggcggccgcgtcctcggcgagatcgaggaatatttc
atcgagatgctggcgccgcaggacacgtttctattcggcggcgaaatcttgcggctgcag
ggcgtcgtcgagaatgaggcgatcgtgtcgcgcgccagcgccgacgcgccgaaaattcct
tcctacgccggcggtaaatttccattgtcgacctatctcgccatgcgcgtccggcgcatc
cttgccacggagtcgtcttgggacacgctgcccgggcaggtggcggactggctcgatctg
cagcgccggcgctccgccctgccgccggccgaccggcttctcgtcgaatcctttccgcgc
ggcgggcgctattatcttgccctctatccattcgaaggacgccttgcgcacacgacgctc
ggcatgctgctgacgcgccggatggagcgcgccggcttaaagccgctgggattcgtcgcc
aatgattatgcgctgtgtatctggtcgctgaccgacgtcggcgcgctgttcgagacggga
gccttgcggctcgaggatttcttgagcgaggacatgctcggcgacgatcttgaggaatgg
cttgaggaatcggcgctgatgaagcggaccttccgcaattgcgcgatcgtctcggggctg
atcgaacgcaatgttctcgaccggcgcaagaccggccggcaggtcaagatttccaccgac
ctcatctacaatgtgctgcgccggtttgagccgcgccatattctgctcgaggcggccaga
gccgacgccgcgacgggcctgctcgacctcgaacggctggccgggctgctgctgcgcgcg
cgcggccggaccatccataaggcgctggcgcgcgtctcgccgctcgcggttccaatcctg
ctcgaaatcgggcgcgaaaccgtctatggcgaggcgcaggatgaaacgctggcggaagcg
gcgcaaacccttgtggacgaagtgctcgccgacagcgcgccggggcggcccgaacttgcc
aatgcggggcgattgggaaatggtcgggcgacgcccgcagccgcgccgcctgcgcgcgcc
agcgtaaggccgaaaggaacgccgccggacaatgcgggactccgcgcgaaaaagacctcg
acgagccgccgcgcttccggtcctcgacgctga

DBGET integrated database retrieval system