Methylocella silvestris: Msil_0268
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Entry
Msil_0268 CDS
T00802
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msl
Methylocella silvestris
Pathway
msl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Msil_0268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msl03019
]
Msil_0268
03016 Transfer RNA biogenesis [BR:
msl03016
]
Msil_0268
Enzymes [BR:
msl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Msil_0268
Messenger RNA biogenesis [BR:
msl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Msil_0268
Transfer RNA biogenesis [BR:
msl03016
]
Prokaryotic type
tRNA degradation factors
Msil_0268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
S1_2
aRib
DUF7909
Motif
Other DBs
NCBI-ProteinID:
ACK49247
UniProt:
B8EP09
LinkDB
All DBs
Position
complement(309091..311235)
Genome browser
AA seq
714 aa
AA seq
DB search
MFEIHREELDWAGRKLTLETGRIARQADGAVLATYGETTVLATVVSARTPKPGIDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYRNDTQVVVTVLSH
DLENDPDILALVATSAALTISGIPFMGPVGGARVGYINGALKLNPTVDELKESALDLVVA
GTGDAVLMVESEAKELSETLMLEAVMTGHRGFQPVIDAIIRLAEKAAKEPRELAVADKAE
VEAAVRDIAEGELREAYKITAKQERYKAVDAVKAKVALALFPEDAEPRFSKEKVAEAFHD
LQAKVVRWNILDLGVRIDGRDLKTVRPILAEVGILPRAHGSALFTRGETQALVVATLGTG
EDEQFVDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVRPMLPTAA
EFPYTIRIVSEITESNGSSSMATVCGSSLALMDAGVPLKRPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTEEGVTSLQMDIKVAGITEEIMKVALDQAKGGRLHILGEMSK
ALTGARAELGEFAPRIETLKIPTDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKVAS
SDGNSIKAAIAWIKSIANDPEVGQIYEGTVVKVVDFGAFVNFFGSKDGLVHISQLAKGRV
AKSSDVVKEGEKVKVKLLGFDDRGKVRLSMRYVDQETGEDLEAKEKAEQQASVD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatccatcgtgaagaactagactgggccggccgaaagctaaccctcgaaacc
ggccggatcgctcgccaggccgacggcgccgtgctcgccacctatggcgaaaccaccgtc
ctcgctaccgttgtctcggcgcgcacgccgaagccggggatcgatttctttccgctcact
gtcaattatcaggaaaaggccttcgccgccgggcgcatcccgggcggttatttcaagcgg
gagggccggccgtccgaaaaggagacgctcgtctcgcgcctgatcgaccgcccgatccgc
cccctgtttccggaaggatatcgcaacgatacgcaggtcgtcgtgaccgtgctgtcgcat
gatctcgagaacgatccggatatcctcgccttggtcgcgacctcggcggcgttgacgatc
tccggcattcccttcatgggcccggtcggcggcgcgcgcgtcggctacatcaatggcgcg
ttgaaactgaatccgacggtcgacgaactcaaggagtccgcgcttgacctcgtcgtcgcc
ggcacgggcgacgccgtcctgatggtcgaatcggaagcgaaagaactgtccgaaacgctg
atgctcgaggcggtcatgaccggccatcgcggcttccagccggtgatcgacgcgatcatc
cgccttgctgaaaaggccgcaaaggagccgcgcgaactcgccgtcgccgacaaggccgag
gtcgaggcggctgtgcgcgacattgctgaaggcgagctgcgcgaagcctataaaatcacc
gccaagcaggagcgctacaaggccgtcgacgccgtgaaggcaaaggttgctctggcgctg
ttcccggaagacgccgagccgcgcttctccaaggagaaagtggcggaggcgttccacgat
cttcaggccaaggtcgtccgctggaacattctcgatctcggcgtgcgcatcgacggacgc
gacctcaaaactgtgcgtccgatcctcgccgaagtcggcatcctgccgcgcgcccatggt
tcggccttgttcacccgcggcgagacgcaggcgctggtggtcgcgaccctcggcaccggc
gaagacgagcaattcgttgacagcctggaaggcacctataaggagcgcttcctgctgcac
tataattttcctccctattccgtcggcgaaaccggccgaatgggctcgcccgggcgccgc
gagatcggccatggcaagcttgcctggcgcgcggtccggccgatgctgccgaccgcggcc
gagtttccctatacgatccgcatcgtctccgagatcacagagtcgaacggctcctcctcg
atggcgacagtgtgcggctcctcgctcgcgctgatggacgcgggcgtgccgctgaagcgg
ccgaccgccggcatcgcgatgggcctcatccttgagggcgaacgtttcgccgtcctgtcc
gatatcctgggcgatgaggatcatctcggcgacatggacttcaaagtcgccggcacggaa
gaaggcgtcacctcgctgcagatggacatcaaggtcgcgggcatcactgaagaaatcatg
aaggtcgcgcttgatcaggcgaagggcggccgcctgcatattcttggcgaaatgtcgaag
gctctgaccggcgcccgcgccgaactcggcgagttcgcgccgcggatcgaaacgctgaaa
atcccgaccgacaagattcgcgaggtcatcggcacgggcggcaaggtcattcgcgaaatc
gtcgaaaagaccggcgccaagatcaatatcgaggacgatggcacggtgaaggtcgcgtcg
tcagacggaaattcgatcaaggcggcgatcgcctggatcaagtcgatcgccaatgatccc
gaagttggccagatctacgaaggcacggtcgtcaaagttgtcgatttcggtgccttcgtg
aacttctttggctcgaaggacggcctcgtgcatatttcgcagctcgccaagggccgtgtc
gcgaaatcctcggacgtggtcaaagagggcgaaaaggtcaaggtgaagctgcttggcttc
gatgatcgcggcaaggttcggctgtcgatgcgttatgtcgatcaggagaccggcgaagat
ctcgaagccaaggaaaaggcggagcagcaggcgtccgtcgattaa
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