Methylocella silvestris: Msil_0595
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Entry
Msil_0595 CDS
T00802
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msl
Methylocella silvestris
Pathway
msl03420
Nucleotide excision repair
msl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Msil_0595
03430 Mismatch repair
Msil_0595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msl03400
]
Msil_0595
Enzymes [BR:
msl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Msil_0595
DNA repair and recombination proteins [BR:
msl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Msil_0595
MMR (mismatch excision repair)
Other MMR factors
Msil_0595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
DUF3553
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACK49567
UniProt:
B8ELH8
LinkDB
All DBs
Position
complement(643059..645431)
Genome browser
AA seq
790 aa
AA seq
DB search
MTDPFSLSETDAPAPQPGGIAARARAAAGGRRYLDGLNPEQRAAVEAIDGPVLVLAGAGT
GKTRVLTTRIAHILAEGRARAHEILAVTFTNKAAREMRDRVALLAGPVGEGMPWLGTFHA
ISTKILRRHAELVGLKSSFTILDTDDQIRLLKQVLKAEDIDDKRWPARSLAYQIDAWKNR
GLDPAHVPAGEAAAFANGKGGRLYALYQERLKILNAADFGDLLLETLRLFKENPDVLKQY
QDRFKYMLVDEYQDTNTVQYLWLRLLAQGRHNVCCVGDDDQSIYGWRGAEVDNILRFESD
FPGAKVIRLERNYRSTGHILAVAAGLIAHNQGRLGKTLFTDDEAGLMPTVTGVWDSEEEA
RGIGEEIEQLARKGHAYDEVAILVRASFQMREFEERFITLGLPYRVIGGPRFYERAEIRD
ALAYLRCVAQPADDLAFERIYNTPRRGLGESTLQQLHEYGRLQRVPLIEAARFMIETDEI
KPKQRQALRDLLANFSRWASLIGEKPHGELTEMILEESGYTDMWRKDRTAEAAGRLENLK
ELVRAMEEFPDLAAFLEHISLVMEAETKDAGPRVSIMTLHAAKGLEFETVFLPGWEEGLF
PHQRSLDESGRAGLEEERRLAYVGITRARRRAKIYFATNRRIHGLWQTTIPSRFLDELPP
DHVEVVEAATGAAYGGYAQSRFANMDSFGSTYGTPGWRRAQRRTEETRAESGASSGGGFA
RKTSQRGPMQIEGELIAKSSASSAFAKGARVFHQKFGYGAVAAVDGNKLTVDFDKAGRKM
VLESFVEAKG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatcctttttcgctctccgagaccgatgcgccggcgccgcagcccggcggcatc
gccgcgcgcgctcgggcggcggcgggcggacggcgctatctcgacggtctgaaccctgag
cagcgcgccgccgtcgaggcgatcgacggtccggttctcgtgctggccggcgccggcacg
ggcaagacgcgcgtgctgacgacgcgcatcgcccatattctcgccgagggccgggcgcgc
gcgcatgaaattctcgccgtgaccttcaccaataaggccgcgcgcgaaatgcgcgaccgc
gtcgcccttctcgccggccctgtgggcgaaggcatgccctggctcggcaccttccacgcc
atttcgaccaagatcctgcgccgccacgccgaactcgtcgggctgaagtcgagctttacc
attctcgacacggacgatcagattcgcctcctgaagcaggttctgaaggccgaagacatc
gacgacaagcgctggccggcgcgctcgctcgcctatcagatcgacgcgtggaaaaatcgc
ggcctcgatccggcccatgttccagccggggaggcggctgctttcgccaatggcaagggc
ggccggctctatgcgctctatcaggagcgcctcaagatcctcaacgcggccgatttcggc
gatctactgctcgaaaccttgcggctcttcaaggaaaaccccgacgtcctgaagcagtat
caggaccgcttcaaatatatgctcgtcgatgaatatcaggacaccaatacggtccaatat
ctctggctgcggctgctggcgcagggccgacacaatgtctgctgcgttggcgacgacgac
cagtcgatctatggctggcgcggcgccgaggttgataatattttgcggtttgagagcgat
tttcccggcgcgaaggtgatccggctcgaacgtaattaccgctcgaccgggcatatcctc
gctgtcgccgccggcctcatcgcgcataatcagggtcggctcggcaagacgctattcacc
gacgacgaagccgggctgatgccgacggtcaccggcgtctgggattcggaagaagaggcg
cgcgggatcggcgaggagatcgagcaactggcgcgcaagggccacgcttatgacgaggtc
gcgatcctcgtgcgcgcctcgttccagatgcgcgaattcgaggagcgcttcatcacgctc
gggctgccctatcgcgtcatcggcggcccgcgcttttatgagcgcgccgaaatccgcgac
gcgctcgcctatctccgctgcgtcgcccagccggccgatgatctcgccttcgaacgcatc
tacaacacgccacggcgcggccttggcgagagcacgctgcaacagctgcatgaatatggc
cggctgcagcgggttccgctcatcgaggccgcgcgcttcatgatcgaaaccgatgagatc
aagccgaagcagcgccaggctttgcgcgatcttctggcgaatttttcgcgctgggcttcg
ctgatcggcgagaagccgcatggcgaactcacagaaatgattctggaggaatccggctat
accgacatgtggcgcaaggaccgcaccgccgaggcggcgggacggctcgaaaatctgaaa
gagctcgtccgcgccatggaagagtttccggaccttgccgccttcctcgaacatatttcg
ctggtgatggaggccgagacgaaggacgccggcccccgcgtctcgatcatgaccttgcac
gcggccaagggcctcgaattcgaaacggtttttctgcccggctgggaggaggggctgttt
ccgcatcagcgctcgctcgatgaatccggcagggcggggctcgaggaggagcgccgcctc
gcctatgtcgggatcacgcgcgcaaggcggcgtgcgaaaatctatttcgccaccaaccgc
cgcatccatggcctgtggcaaacgacgattccctcacgatttctcgatgagcttccgccc
gatcatgtcgaggtggtcgaggcggcgacgggcgcggcctatggcggctatgcgcaatcg
cgcttcgccaatatggatagtttcggctcgacctatggcacacccggctggcgccgtgcg
cagcgccgcacggaggagacgcgcgccgaaagcggcgcctcaagcggcggcggctttgcg
cgcaaaacgtcgcaacgcgggccgatgcagatcgagggcgaattgatcgcaaaatcgagc
gcgtcatcggcctttgcaaagggcgcgcgcgtattccaccagaaattcggctatggcgca
gtggccgcggtcgacggcaacaagctgacggtggatttcgacaaggctggacgcaaaatg
gtgttggagagctttgtcgaggcgaaggggtga
DBGET
integrated database retrieval system
