Methylocella silvestris: Msil_1391
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Entry
Msil_1391 CDS
T00802
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msl
Methylocella silvestris
Pathway
msl03030
DNA replication
msl03410
Base excision repair
msl03420
Nucleotide excision repair
msl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Msil_1391
03410 Base excision repair
Msil_1391
03420 Nucleotide excision repair
Msil_1391
03440 Homologous recombination
Msil_1391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msl03032
]
Msil_1391
03400 DNA repair and recombination proteins [BR:
msl03400
]
Msil_1391
Enzymes [BR:
msl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Msil_1391
DNA replication proteins [BR:
msl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Msil_1391
DNA repair and recombination proteins [BR:
msl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Msil_1391
NER (nucleotide excision repair)
GGR (global genome repair) factors
Msil_1391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
ACK50356
UniProt:
B8ESM1
LinkDB
All DBs
Position
1502422..1505463
Genome browser
AA seq
1013 aa
AA seq
DB search
MPTPASQTPVQSGDHVFLVDGSSFVFRAYFQSIRQDAKYNYRSDGLPTGAVRLFCTKIFQ
FVREGAAGVKPTHLAIIFDKSENSFRKEIYPPYKGNRSEPPEDLIPQFPLMRAAVRAFGL
LPVEQDRYEADDLIATYARQARERGADVTIISADKDLMQLIGPGVSMYDPASGEAGAKGS
REERRIGVDEVLAYFGVPPEKVVDVQALAGDSTDNVPGARGIGLKTAAQLIGEYGDLDTL
LARAGEIKQPKRREILTDADSVALIRTSRKLVELVCDVEVETPLDDLRLAAPEGKTLVAF
CKALEFTTLTRRVAEACAVEPALIEPDPDFAGEAGWRGRNGAPPPVSTAAETPSAENLPQ
GPKRNARYGAEAPQQTIATGPGELAAARAAQARAEKFDLGAYETIVSFERLEAYIAEAIE
SGIIAIDTETSSLDPMQAELVGLSLCLAPGRAAYVPLRHRGEGAGDLFGGADLVPGQLDS
DETLARLKPMLEAPDVLKIAQNAKFDQLVLAQRGIRLAPVDDTLLLSYVLDAGRTDHGMD
VLAEKYFGHRPIQFGAVAGSGRTFIGFARVALDKATEYSAEDADVTLRLWRVLKPRLAAE
RMSAVYETLERPMVETLARMERRGVSIDRAILSRLSGEFAQDMARLEAVIFELAGESFNL
GSPKQLGDILFGKMGLAGARKTATGAWSTAAGVLDDLAEQGVPLAARILDWRQLSKLKST
YTDALPSYVNPETGRVHTSYALAATTTGRLSSSEPNLQNIPVRNEAGRKIRKAFIAPPGR
KLISADYSQIELRLLAHIADISQLRAAFAENLDIHAMTASEMFGVPVEGMPPEVRRRAKA
INFGIIYGISAFGLANQLAIPREEAGAYIKRYFERFPGIRAYMDATKQFARENGYVTTIF
GRKCHYPRITASNPSERAFNERAAINAPIQGSAADIIRRAMVRMDEALEKAGLSAQMLLQ
VHDELVFEAPDEEIDATIDVVRKVMVDAPHPFLQLAVPLQVDAKAAQNWDEAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccccagcctcccaaacgcctgtccagtccggcgaccacgtctttctcgtcgac
gggtcgtctttcgtgttccgcgcctatttccagtcgatccggcaggacgccaaatataat
taccgctccgacggcctgccgacgggggcggtgcggctgttctgcaccaaaatcttccag
ttcgtgcgcgagggcgcggccggcgtgaagccgacccatctcgccattattttcgataaa
tccgagaattcgttccggaaggaaatctacccgccctacaagggcaaccgttccgagccg
cctgaggatctgatcccgcagtttccgcttatgcgcgccgcggtgcgcgcgttcggcctc
cttcccgtcgagcaggaccgctatgaggccgacgatctcatcgccacctatgcgcggcaa
gcgcgcgagcgcggcgccgacgtcacgattatctcggccgacaaggatctgatgcagctg
atcgggcccggcgtctcgatgtatgatccagcgtccggcgaggccggcgcgaaaggctcg
cgagaggagcgccgcattggcgtcgacgaggttttggcttatttcggcgtgccgcccgaa
aaagtcgtcgacgtgcaagcgctggccggcgattcgaccgataatgtgcccggggcgcgc
ggcatcggcctcaaaaccgccgcgcagcttatcggcgaatatggcgatctcgacacgctg
ctggcgcgcgccggcgagatcaagcagccgaagcggcgcgagattctgaccgacgcggat
agcgtcgcgctgatccgcacatcgcgaaagctcgtggagctcgtctgcgacgtcgaggtc
gaaacgccgctggacgatctgcgcctcgccgcgccggagggcaagaccctcgtcgccttc
tgcaaggcgcttgaatttacaacgctcaccaggcgtgtggccgaggcttgcgccgtcgag
ccggcgctgatcgagccggacccggatttcgccggcgaagccggatggcgcggccgcaac
ggggcgcccccgcccgtttccaccgcggccgaaacgccatccgccgaaaatctgccgcaa
gggccgaagcgcaatgcgcgctatggcgccgaggcgccgcaacagaccatcgcgacgggc
cccggcgaacttgccgctgcgcgggcggcgcaagcgcgtgcggaaaaattcgatctcggg
gcgtatgagacgattgtgagcttcgagcggctcgaggcctatatcgcggaagcgatcgaa
tccggcattatcgcgatcgacacggaaacctcctcgctcgatccgatgcaggccgagctc
gtcggcctgtcgctttgcctcgcccccggccgcgccgcctatgttccgctgcgccaccga
ggcgagggcgcgggcgatctctttggcggcgctgatctcgtccccggccagctcgactcc
gacgaaacgctggcgcggctgaagccgatgctggaggcgccggacgttctcaaaatcgcg
cagaacgccaaattcgaccagcttgtactggcgcagcgcggcataaggctcgctcccgtc
gacgacacgctgctgctgtcttatgtgctcgacgccggccgcaccgatcacggcatggac
gtgctcgccgaaaaatacttcggccatagaccgattcagttcggcgccgtcgcaggctcg
ggccggacgttcatcggcttcgcccgcgtcgcgctcgacaaggcgacggaatattccgcc
gaagacgccgacgtcaccttgcggctctggcgggttttgaagccgcgccttgcggccgag
cgcatgagcgccgtctatgagacgctggagcggccgatggtcgaaactctcgcgcgcatg
gagcggcgcggcgtctcgatcgaccgggcgattttatcgaggctctccggcgaattcgca
caggatatggcgcggctggaggcggttattttcgagctcgccggcgaaagcttcaatctc
ggctcgccgaagcaattgggcgacatattattcggcaagatgggccttgcgggagcgcgc
aaaaccgcgaccggcgcctggtcgacggcggccggcgtgctggacgacctcgccgaacag
ggcgtcccgctcgccgcccgcattctcgactggcgccagctgtcgaaactgaaatcgacc
tacaccgacgccctgccctcctatgtcaatcctgagaccggccgcgtgcatacctcctat
gcgctcgcggcgacgacaacaggacggttgtcctcgtcggagcccaatctgcagaatatt
cccgtgcgcaacgaggcggggcgaaagatccgcaaggcttttattgcgccgcccggcagg
aagctgatctcggccgactacagccagattgaattgcgcctgcttgctcatattgccgac
atttcgcaactgagagccgcctttgccgagaacctcgacattcacgcgatgacagcgtcc
gagatgttcggcgtgccggtcgagggcatgccgcccgaggtgcgccgccgcgccaaggcg
atcaatttcggcatcatctatggcatttcagcattcggcctcgccaaccagctggccatt
ccgcgcgaggaggccggcgcctatatcaagcgctatttcgagcgctttccgggcatccgc
gcctacatggacgcaaccaaacaatttgcgcgcgagaatggctatgtgacaaccattttt
ggccgcaaatgccactatccgcgcatcaccgcctcaaacccatcggaacgcgcctttaac
gaacgcgccgccatcaacgcgccgatccagggctcggcggcggacatcatccggcgcgcg
atggtccgcatggacgaggctttggaaaaagcgggcttgagcgcgcagatgttgttgcag
gtgcatgacgagcttgtgtttgaagcgccggacgaggagatcgacgccacgatcgatgtg
gtgcgcaaggtgatggtcgacgcgccgcatccgttcctgcaactcgccgtgccgctgcaa
gtcgacgccaaggcggcgcagaactgggacgaggcgcattag
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integrated database retrieval system
