Methylocella silvestris: Msil_1412
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Entry
Msil_1412 CDS
T00802
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msl03400
]
Msil_1412
Enzymes [BR:
msl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Msil_1412
DNA repair and recombination proteins [BR:
msl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Msil_1412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
NPHP3_N
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACK50377
UniProt:
B8ESP2
LinkDB
All DBs
Position
complement(1524075..1527530)
Genome browser
AA seq
1151 aa
AA seq
DB search
MDLAAISPQTLQKQREASDPAASVWVSANAGSGKTHVLAQRVVRLLLQGTPPSKILCLTF
TKAAAANMSMRVFNTLARWTALDDAELRRAIVATGAPSPDWREMREARKLFARTVETPGG
LKIQTIHAFCERLLHLFPFEANAPSRFEVADEERQGELLARARNDVLGSAAEADHELKAI
VDRVAGECSEYGFATLLEQALRLRARLREAWPKDHESVLRKALDVAPGRDVAAIRQDMLE
GGIAPSRWSELAAFLETGTKTDCDRAAAFRDAAARHAAGDSEGCRDVYLQIFFTDKGEKA
KRLLTRGLAAKNLAIEAALYAEQERLDRLRAEEKSAATLERSAALGRLVDAIFARYQKLK
YERVILDFDDLVAKTLTLLERSDASWVLYKLDAGIDHILIDEAQDTSEAQWRILEGLMAD
FAVGHGRNLAPRTFFAVGDEKQSIFSFQGAAPHMFHEMQRKFERKFINGGERFSHVRLTH
SFRSAAGVLGAVDSVFGRAESQSGLVAPADVWMGHEPLKTLPSLVEIWPSVGAGGKAENS
DWRLPLDFRDESDPPSRVATRIAEKIAALIEPRSGERVHDGESGVLRAVRAGDILILVRT
RGPFFEAVIRALKQKGVPVAGADRLKLGEHIAVQDLVAAGRAALLPEDDLNLAAALKSPL
IGLDDDDLIALAPGRPGSLFAALLASPDSRFRPARETLGRWRARAAARPFAFYASLLGED
QGRRAIEGRLGVEAVDAVDEFLRLALAHEAEPAPSLAGFLADFETVQREVRRDMESGGDV
VRVMTVHAAKGLEAKIVFLPDTCGGLSAQHDPSVFALEETHLGAAPVVWSPRKAEDCDKA
AAARKRLRELAEDEYRRLLYVALTRAEERIYICGFHGAKKPPELCWANMIEATLAPTLQQ
APAFWNVEEFVLRRLSPGADLAVQETAAPVEGGSLIAPGWLSRRLDPLEEPAAPMRPSSA
LAASDRRADAAGRREALQLGSLTHILLQYLPDQPVEARARAGLAYLAVRAKGLDEAAHER
LLQAALAVIAAPQLEPLFGAGSRAEVAVAGKIALPGGASVDVIGRIDRLGLSEGEVWVAD
FKTGAPPAPGEVPQSYLTQMALYRAALRPLWPERRLRMILIFTEGPQIIELAEAALDAAL
AAVAAAKRPAP
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgccgcgatttcgccgcagacgctgcaaaagcagcgcgaagcctccgacccc
gccgcctcggtctgggtctccgccaacgccggttcgggcaagacccatgtgctggcgcag
cgcgtggtgcggctgctgttgcagggaacgccgccgtcgaagattctctgcctgacgttc
accaaggccgccgccgccaatatgtccatgcgcgtcttcaacacgctcgcgcgatggacg
gcgctcgacgatgcggagctgaggcgggcgatcgtagccaccggcgcgccgtcgccggac
tggcgcgagatgcgcgaggcgcgaaagctgttcgcgcgtacggtggagacgccgggcggg
ctgaaaatccagaccatccacgccttctgcgaaaggctgctgcatctctttccgttcgag
gcgaatgcgccttcgcgcttcgaggtcgccgacgaggagcggcagggtgaactgctcgcc
cgcgcccgcaacgacgtgctgggcagcgccgcggaggccgatcacgagcttaaagcgatc
gtcgatcgagtcgcgggagaatgttccgaatatggctttgcgacgctgctcgaacaggcg
cttcgccttcgcgcgcggctgcgcgaggcctggccgaaggatcacgagagcgttctgcgc
aaggcgctggacgttgcgccgggccgcgacgttgcggcgatccggcaggatatgctggag
ggcgggatcgcgccttcgcgctggagcgaactggcggcctttctcgaaacgggaaccaaa
accgattgcgatagggcggccgctttccgcgacgcggcggcgcgtcacgccgctggcgac
agtgagggttgccgcgacgtctatctccagatcttttttaccgacaaaggcgagaaagcc
aaaaggctcctgaccagaggcctcgcggcgaaaaatctcgcgatcgaggccgcgctctac
gcggaacaagagcgtctcgatcgtctgcgggccgaggaaaaatcggccgcgacgctggag
cgctcggccgcgctcgggcgtctcgtcgacgccatcttcgcgcgctatcaaaaactcaaa
tatgagcgcgtcatcctcgacttcgacgatctcgtcgcgaagacgctgacgctgctggag
cgctccgacgcctcctgggtgctctacaagctcgacgcgggcatcgaccatattctgatc
gacgaggcgcaggatacaagcgaggcgcaatggcgcattcttgaggggctgatggccgat
ttcgccgtcggccatggccgcaatcttgcgccgcgaaccttctttgcggtcggcgacgaa
aagcagtcgatcttttcgttccagggcgcagcgccgcatatgtttcacgagatgcagcgc
aaattcgagcgcaagttcatcaacggcggcgagcgtttctcgcatgtgcggctgacccat
tcgttccgctcggcggctggcgtgctcggcgccgtcgacagcgtctttggccgggccgaa
agccaaagcgggctggtcgcgcccgccgacgtctggatggggcatgagccgctaaaaact
cttccgagccttgtcgagatctggccctcggttggagcgggcggcaaggcggaaaacagc
gattggcgcctcccgctcgatttccgcgatgagagcgaccctccgagccgcgtcgcaacg
cgcatcgccgaaaaaatcgcggcgctcatcgagcctcgctcgggcgagcgcgtccatgac
ggcgagagcggcgttttgcgggccgtccgcgccggcgacattctcattcttgtgcgcacg
cgcggacctttcttcgaggcggtgatccgggcgctgaagcaaaagggcgttccggtcgcc
ggcgccgaccggctgaagcttggcgaacatatcgcggtgcaggatctcgtcgcggccggc
cgcgccgccctgctgccggaggacgatctcaatctcgccgcggcgctgaaatcgccgctg
atcgggctcgacgacgacgatctcatcgccttggcgccggggcgtcccggcagtcttttt
gcggcccttcttgcgtcacccgattcgcgcttcaggccggcgcgcgagacgctcggccga
tggcgcgcgcgcgccgccgcgcggcccttcgccttctacgccagccttcttggcgaggat
cagggccggcgcgccatcgaaggccggctcggcgtcgaggcggtcgacgcggtcgacgaa
ttcttgcgcctggcgctcgcccacgaggccgagcccgcgccttcgctcgccggttttctc
gccgatttcgagaccgtgcagcgggaggtccggcgcgatatggagagcggcggcgacgtc
gtccgtgtcatgacggtccatgccgcgaaggggcttgaggccaaaatcgtctttttgccc
gatacctgcggcgggctctccgcgcagcacgatccaagcgtctttgcgctggaggaaacc
cacctcggcgcggcgcctgtcgtctggtcgccgcggaaggccgaagactgcgacaaggcg
gcggcggcgcgaaagcgcctgcgcgaacttgccgaggacgaatatcgccgcctgctctat
gtcgccctgacgcgcgccgaggagcggatctatatttgcggctttcacggcgccaaaaag
ccgccggagctttgctgggcgaatatgatcgaggcgacgctcgcgccgaccttgcagcag
gcgccggccttctggaatgtggaggaatttgttctgcggcggctatcgccgggggctgat
ctggcggttcaggagaccgcggcgccggtagagggaggaagcctcatcgctcccggatgg
ctgtcgcgccggctcgatccgctggaagagccggcggcgccaatgcgcccgtcgagcgcg
ctcgccgcctccgaccgccgcgccgacgccgcgggacggcgcgaggcgctgcagcttggc
tcgcttacgcacattttgctgcaatatctccccgatcagccggtcgaagcgcgggcgcgc
gcggggctggcctatctcgccgttcgggcgaagggtctcgacgaagcggcccatgaacgt
ctcctgcaagccgccttggcggtcatcgccgcgccgcagcttgagcccttgttcggtgcg
ggctccagggcggaggtcgccgtcgccggcaagatcgcgctgccgggcggagcttcggtc
gacgtcatcggccggatcgatcggctggggctgtcggagggcgaggtttgggtcgccgac
ttcaagaccggagcgccgccagcgcctggcgaggtcccgcaatcctatctgacgcagatg
gcgctctaccgcgcggcgctgcggccgctttggccggaacgccggctgcgcatgattttg
atctttacggaaggcccgcaaatcattgagctcgccgaagcagccctcgacgcggcgctg
gctgctgtcgccgctgcgaaacgcccggctccttga
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