Methylocella silvestris: Msil_1413
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Entry
Msil_1413 CDS
T00802
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msl03400
]
Msil_1413
Enzymes [BR:
msl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Msil_1413
DNA repair and recombination proteins [BR:
msl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Msil_1413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACK50378
UniProt:
B8ESP3
LinkDB
All DBs
Position
complement(1527530..1530661)
Genome browser
AA seq
1043 aa
AA seq
DB search
MPKKNVFTIAPGAPFLKTFAEAFLDGRVVEGFCAGENPLELAEATIYVPTRRAARALTDE
FFRALPTKAVLLPRILPLGALDESETELLFEDGGADEFSAPLEPPLAIGEIDRRMQLAEL
CLSWSRLLRHAIVRVEADGARVLDERESLLVGATAADAWGLSGDLARLIDELIIEDIDWA
RLDPLASEGFDDYWRITLDFLKIAITQWPHILEQRGLVDRARRQVSLIERQSLALRDAPG
LGPVVAIGSTGSNRATARLLDAIASAPRGAIVLPGLDLKLDEAAFALVARAADEGEPAFT
HPQAALCRLLRTLNMSRDEVRPLGALTKAQDARERFISEALRPAEATDAWIAYRQAIDPA
LLEEALAGVTLIEAADEREEALALAIAMRHALERPDGTAALVTPDRELARRVAAELLRWG
VRVEDSAGEPLGSGEAGLLARLVAACAADDMSAATVAALMAHGALRLGFSREEIARLRPL
LEIGVLRAAAGGKLRDPARAIELAAAQADGPHAHPAQKRIFPRESDALRDFLMRLEAALR
PMLEAGGERDLAFWVEAHRTALAAIRAGEPEEEDSGEDGEALAALFEELALSATSEMRFD
AEAYQFFFAAVAGEARLGAAGRTHPRLKILGLLEARLMDVDVMLLGGLDESVWPPQARAD
AFLNRPMRAALGLSPPERKLGQTAHDFVQAMGRDKVVLSRAAKRGGAPTVASRFIQRLAA
LGGPAWAACAARGKTYLDLARLIDRPAAAPAPLRRPEPKPPVALRPNRLSVTKIETLRRD
PYAVYAETILKLLPLDSIGRTPGPAETGSAIHAAIEAFTASFGPGPLPAGARDTLRALLL
KALEDNLADPGFAAFYVPRLKQMIDFYMGFEASRRSGLDEIRTEAAGRLEFFLSDGSPFA
LTARADRIERAASGKLSLIDFKTGAPPGIKEIEVGFAPQLTLEAAMAKRGAFGPAGQDEI
DALYVKLNGPGGGKVKPVVFKGRTVEDVADQHFAHLVELLSQFRDPDRSYPPRPFPKFAK
AYNAYDHLARVKEWSAGGESEDA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaaaaaaaacgtcttcaccatcgcgcccggggcgccatttctgaaaacttttgcg
gaggcgtttctggatggacgcgtcgtcgaagggttttgcgcgggcgaaaatccgctggag
ctggccgaggcgacgatctatgtgccgacgcgccgcgccgcccgcgcgctcacggatgag
ttttttcgcgcgctgccgacaaaggcggtgctgctgccgcgcatcctgccgcttggcgcg
ctcgacgaaagcgagacggagctccttttcgaggatggcggggcggatgaattttcggcg
cccctcgaaccgccgctcgccattggcgagatcgaccggcgcatgcagcttgccgaattg
tgtctctcctggtcgcgcctgctgcggcacgccatcgtgcgggtcgaggcggacggcgcc
cgcgtcctcgacgagcgcgaatcgctgctagtcggcgcgaccgccgcggacgcctggggg
ctttccggcgaccttgcgcggctgatcgacgaactgatcatcgaggacatcgactgggcg
cgcctcgatccgctcgcctcggagggattcgacgattattggcgcatcacgctcgatttt
ctcaaaatcgccatcacgcaatggccgcatattctggagcagcgcggtcttgttgaccgg
gcgcggcgtcaggtctcgctgatcgaacggcagagcctcgccctgcgcgatgcgccggga
ctcggtcccgtggtcgcgatcggctccacgggctccaaccgcgcgaccgcgcggctgctt
gacgccatcgccagcgcgccgcgcggcgccatcgtgctgccgggcctcgatctgaagctt
gacgaggcggcgttcgctctcgtcgcccgcgccgcggacgagggcgagccggccttcacc
catccgcaggcggccctgtgccggcttttgcgcaccctcaatatgtcgcgcgacgaggtg
aggccgcttggcgctcttacgaaagcgcaggacgcgcgcgagcgttttatctccgaggcg
ctgcgcccagcggaggcgaccgacgcctggatcgcctatcggcaggcgatcgatcccgcg
ctgcttgaagaagcgctggcgggcgtgacactgatcgaagccgcggacgaacgcgaggaa
gcgctcgccctcgccatcgccatgcgccacgcgctggagcgcccggacggaacggcggcg
ctggtgacgccggaccgcgaacttgcccgccgcgtcgccgccgaactgctgcgctggggc
gtccgcgtcgaagattcggcgggagagccgcttggctccggcgaggccggattgctggcg
cgactcgtcgccgcctgcgctgccgacgatatgagcgcggccaccgtcgccgcgctgatg
gcgcatggcgcgcttcgtcttgggttttcgcgcgaggagatcgcgcggctccgcccgctg
cttgagatcggcgtgctgcgcgcggcggcgggcgggaagctgcgcgatcccgcgcgcgcg
atcgaactggccgcagcgcaagcggatgggccgcacgcgcatccggcgcagaagcgcatt
tttccacgcgaatccgacgccctgcgcgacttcctcatgcggcttgaggcggctctgcgg
ccaatgctggaagcgggcggcgagcgcgatctcgccttctgggtcgaggcgcaccgaacc
gcgctcgcggcgatccgcgccggcgagcccgaagaggaggattcgggcgaggacggcgag
gctctggccgctctgttcgaggagcttgccttgagcgcgacgtcggaaatgcgcttcgac
gccgaggcctatcagtttttcttcgcggccgtcgctggcgaggcgcgcctcggcgccgcc
ggccggacgcatccgcgcctgaaaatcctcggcctcctcgaagcgcggctgatggacgtc
gatgtgatgctgcttggcggcctcgatgagtccgtctggccgcctcaggcgcgcgccgac
gcctttttgaaccggcccatgcgggcggcgctcggcctctcgccgccagagcgcaagctt
ggccagacggcgcatgatttcgtgcaggcgatgggccgggacaaggtcgttttgagccgg
gcggcgaagcgcggcggcgcgccgacggtcgcctcgcgcttcatccagcggctcgccgcg
ctcggcggtccggcgtgggcggcctgcgccgcccgcggcaaaacctatcttgatctggcg
cggctgatcgaccggccggcggcggcgccggctccgctgcggcggcctgagccaaagccg
ccggtcgcgctgcgcccgaaccggctcagcgtcacgaaaatcgagacgctgcggcgcgat
ccttatgcggtctacgccgagacgattctaaagctgcttccgctcgattcgatcggccgc
acgccggggccggccgaaaccggcagcgcgatccacgccgcgatcgaggcttttaccgca
tcgtttgggccgggaccgctgccggcgggggcgagggacacattgcgcgccctgctgctc
aaggcgctggaggacaatctggccgatcccggctttgccgctttctatgttccgcggctc
aagcagatgatcgatttttacatgggtttcgaggcgtcaaggcgcagcgggctcgacgaa
atcaggaccgaggcggccggccggctcgaatttttcctgagcgacggctcgcccttcgcc
ctgaccgcgcgcgccgaccgaatcgagcgggcagccagcggcaagctcagcctgattgac
ttcaagaccggcgcgccgccggggatcaaggaaatcgaggtcggctttgcgccgcagctg
acgctagaggcggcgatggccaagcgcggcgccttcggccctgcggggcaggacgagatc
gacgcgctttacgtcaaactcaacgggccgggcggcggcaaggtcaagcccgtcgtcttc
aaggggaggacggtcgaagacgtcgcggaccagcatttcgcgcatcttgtcgaattgctg
agccagttccgcgatccggatcgctcctacccgccgcgcccctttccgaaattcgccaag
gcctacaacgcctatgatcacttggcccgcgtcaaggaatggtcggcgggcggcgagagc
gaggacgcctga
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integrated database retrieval system
