Methylocella silvestris: Msil_1647
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Entry
Msil_1647 CDS
T00802
Name
(GenBank) chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msl
Methylocella silvestris
Pathway
msl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Msil_1647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msl03019
]
Msil_1647
03110 Chaperones and folding catalysts [BR:
msl03110
]
Msil_1647
03029 Mitochondrial biogenesis [BR:
msl03029
]
Msil_1647
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msl04147
]
Msil_1647
Enzymes [BR:
msl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Msil_1647
Messenger RNA biogenesis [BR:
msl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Msil_1647
Chaperones and folding catalysts [BR:
msl03110
]
Heat shock proteins
HSP60 / Chaperonin
Msil_1647
Mitochondrial biogenesis [BR:
msl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Msil_1647
Exosome [BR:
msl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Msil_1647
Exosomal proteins of other body fluids (saliva and urine)
Msil_1647
Exosomal proteins of breast cancer cells
Msil_1647
Exosomal proteins of colorectal cancer cells
Msil_1647
Exosomal proteins of bladder cancer cells
Msil_1647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACK50595
UniProt:
B8EK55
LinkDB
All DBs
Position
complement(1780624..1782267)
Genome browser
AA seq
547 aa
AA seq
DB search
MPKMMLHGAQARAALARGVAKLTAAVGGTLGPRGLNTIIDRPTGTPIVSRDGVSIADEIE
LECRFENLGAQIVREVSKQTAEIAGDGTTTATVLANALVQEGIAILAEGGAAAADLIEGL
DAAEDAMVLALNGRARPLSGGGELRCVASVAGADAKLADVVARALEAVGAEGVITLEQGD
ADDDVMEIIEGFSFDRGYVSHHMITDVPTMRAILHDAYILLTDHKITRFEQIQALVEEVQ
ARDASLLIIADEADPKVLIGLLATRSTGRGRFLVVNPPDFGHWRKQMMEDIAILTGGEVI
SGDLGYLLERAKLDALGRAECVISSQFETMILKGRGAPDAIDARRAQIRQQIELAPQNIE
RDKLDERLSKMTSGTVRVKAGGVTPAERRRRLQLLDDALCAGRAALRQGIVAGGGATLAE
LAGQIAPAPAADANEGVAKGISLFCSAMRQPLRQIVENAGRDPHAIVEAVIQAPAGVGFD
ARSGKLADMFEAGVIDPVLVTIASVRNAVSSAKLILGTNTLIVDRIEQVDPTAGPARGGG
AEFLGRA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatgatgttgcatggagcgcaggcgcgcgcggcgctggcgcgcggagtggca
aagctcacggcggcagtcggcggcacgctaggtccgcgcggattgaacacgattattgat
cgacccacggggacgccgatcgtctcgcgcgatggcgtcagcatcgccgacgaaatcgaa
cttgaatgccggttcgaaaatcttggcgcgcagatcgtgcgcgaagtctcgaagcagacg
gctgaaatcgccggggacggcacgacgaccgcgaccgtgctcgccaacgcgctggttcag
gaagggatcgcaattcttgccgaaggcggagcggcggcggccgatctgatcgaaggattg
gacgcagccgaggacgccatggtcctggcgctgaacgggcgcgcaaggccgctttccggc
ggcggcgaattgcgttgcgtcgcctcggtggccggagccgacgccaagctcgcagatgtt
gtagctcgcgcgctcgaggcggttggcgccgaaggcgtcataacgctggagcagggagac
gccgacgacgacgtgatggagattattgaaggcttttccttcgatcgcggctatgtctcg
catcatatgatcaccgacgtcccaaccatgcgggctatcctgcacgacgcctatattctg
ttgacggaccataagatcacccgcttcgagcagatccaggcgcttgtcgaggaggttcag
gcgcgggacgctagcctgctcatcatcgccgacgaggcagatccgaaagtgttgatcggt
ctgcttgcgacgcgaagcacaggccgggggcgtttccttgtcgtcaatccgccggatttc
ggtcattggcgcaagcagatgatggaggatatcgccatcctgaccggcggcgaggtcata
tccggggaccttggctatctgctcgaacgcgcgaagcttgacgctctcgggcgggccgaa
tgcgtgatttcctctcaatttgagacgatgattctcaaaggacgcggcgcgccggatgct
atcgacgcgcggcgcgcccaaattcgccagcagatcgaattggcgccgcaaaatatcgag
cgggataagcttgacgagaggctctcgaagatgacgtcgggcacggtgcgcgttaaagcc
gggggcgtgacgcccgccgaacgccggcgccgtttgcaattgctcgatgacgcgctttgc
gccggccgcgctgcgctgcgtcagggcatcgtagcgggcgggggagcgaccctcgctgaa
ctcgccggacagatcgcgccggcgcccgcggcggacgcgaatgagggcgtggccaaggga
atatcgctgttctgctcggccatgcgccagcctctgcggcagattgtcgagaatgcgggg
cgtgatccgcacgcgattgtggaggcggtgatccaggcgccggccggcgtcggcttcgat
gcgcgttcgggcaaactggcggatatgttcgaggcgggcgtgatcgaccccgtgctggtg
acgatcgcttccgtccgcaatgcggtttcctcggcaaagctcattcttgggacgaatacg
ttgatcgtcgaccgcatcgagcaggtcgatccgaccgccggtcccgcgcggggcggcggc
gctgaatttctggggcgcgcgtga
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