Methylocella silvestris: Msil_1698
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Entry
Msil_1698 CDS
T00802
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msl
Methylocella silvestris
Pathway
msl03030
DNA replication
msl03430
Mismatch repair
msl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Msil_1698
03430 Mismatch repair
Msil_1698
03440 Homologous recombination
Msil_1698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msl03032
]
Msil_1698
03400 DNA repair and recombination proteins [BR:
msl03400
]
Msil_1698
Enzymes [BR:
msl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Msil_1698
DNA replication proteins [BR:
msl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Msil_1698
DNA repair and recombination proteins [BR:
msl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Msil_1698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
HROB
DUF6374
Motif
Other DBs
NCBI-ProteinID:
ACK50645
UniProt:
B8EKA5
LinkDB
All DBs
Position
complement(1843246..1846704)
Genome browser
AA seq
1152 aa
AA seq
DB search
MSQKSAEAGLGFVHLHVHSSFSLREGAMGIGKLAKLAAADHMPALAITDGNNLFGALEFS
EKLAKEGVQPIIGAELTLDFRDGAAISARGEELGAGRASIVLIAKDEAGYLNLMHLVSRA
WLDPEPGDPPHVPIERLRGRTGGMIALSGGPAGPLDRAFAARRSEQAFARAAQLAELFPD
RLYIELQRHNLAAEREAEPRLLDLAYRKSLPLVAANEPYFGTSSDYEAHDALICIAEGTV
IGDGARRQLSPEHRFKTRAEMVALFADLPEASRNTVEIARRCAFRPLTRKPLLPRFSATG
ELEAEADALRSEAEAGLEARIEAHGLAKGFTAEDYRKRLAFELDVIVKMKFPGYFLIVSD
FIKYAKSQGIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDF
CQDRRDEVIAYVRRRYGADKVAQIITFGSFLARGVLRNVGRVLEMPLGQVDRLAKLVPQN
PAAPVSLKQAIDSEPRLKEAAEAEPRVAKMLQIAQTLEGLYSNASTHAAGIVIGDRPLEQ
LVPLYRDPKSDMPATQFNMKWVEPAGLVKFDFLGLKTLTTLSTCVKLLRRRGIEIEIDKI
PLDDSKTYAMLGRGETIGVFQLESAGMRRALVDMHADRFEDIIALVALYRPGPMANIPRY
CAVKAGEEEADYIHPKIEGVLKETFGVIIYQEQVMQIAQILSGYSLGEADLLRRAMGKKI
KAEMDAQRDRFLRGAIDNGLAKAKANEIFDLLAKFADYGFNKSHAAAYALIAYQTAWFKA
NYPLEFLAASMTLDKANTDKLAEFSNEARRLNGAVEPPSIQRSGADFEVCANDAGELQIR
YALGAIKGVGQGHAEALVAARNSKPFRDFADFSARIDPRAINKRMLESLVAAGAFDEMEP
DRARVFAAIETILASAHRRDEERRAGQSALFGAGAEDRMPLPKVAPWTLAERLRREFDSV
GFFLSGHPLDAYATIMSRLRVQRWTEFSRAVKLGATGGRLAATVLDRQERRTKSGSKMGI
VQLSDPSGQYEAILFQEGLNQYRDLLEKGASLLLVLQAAVEGDEVRARIVSAEPLDHAAS
RVQKGLRIFVADDKPLDQIKQSLRPQGDGEVALILQTPECEIELKLPGKYGVSAQSAGAL
KAIPGILAVEHV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaaatccgctgaagccgggcttggctttgtgcatctccacgtccacagctcc
ttttccttgcgggagggagcgatgggcatcggcaagctcgccaaactggccgcggccgac
catatgccggcgctggcgatcaccgacggcaataatctgttcggcgcgctcgaattctcc
gaaaagctcgccaaggaaggcgtgcagccgatcatcggcgccgagctcacgctcgacttt
cgggacggcgccgcgatctctgcgcgcggcgaggagctcggggccggccgcgcctcgatc
gtcctcatcgccaaggacgaggccggctatctcaatctgatgcatcttgtctcgcgcgcg
tggctggatccggagccgggcgatccgccgcatgttccgatcgagcggctgcgcgggcgg
acgggggggatgatcgcgctcagcggcggcccggcggggccgctcgaccgggcgttcgcg
gcaaggcgctccgaacaggcatttgcgcgcgcggcgcagctggcggagcttttccctgac
cgcctctatatcgagttgcaacgccacaaccttgccgccgagcgcgaggccgaaccgcgg
ctgctcgatcttgcctatcgcaaatcgctgcccctggtcgccgccaacgagccctatttc
gggacaagctccgactacgaggcccatgacgcgctgatctgcatcgccgaggggacggtc
atcggcgacggcgcccgccggcagctctcgcccgagcaccgcttcaagacccgggcggaa
atggtcgcgctgttcgccgatttgcccgaggcgagccgtaacaccgtcgaaatcgcgcgc
cgctgcgccttccggccgctgacccgcaagcccctgctgccgcgtttttccgcgacgggc
gagctcgaggcggaagccgacgcgttgcgcagcgaggctgaggccgggcttgaggcccgc
atcgaggcgcatgggctcgccaagggttttacggcggaggattatcgcaagcgtcttgcc
ttcgagctcgacgtcatcgtcaaaatgaagtttccgggctatttcttgatcgtctcggac
ttcatcaaatacgccaaatcgcagggcattccggtcggtccggggcgcggatcgggcgcg
ggctcgctcgtcgcctacgccctcaccatcaccgatcttgacccgatccgcttcggcctc
ctgtttgagcgctttctcaatcccgagcgcgtctcgatgccggatttcgacatcgatttc
tgccaggaccgccgcgacgaagtcatcgcctatgtgcggcgccgctatggcgcggacaag
gtggcgcagatcatcaccttcggctcgtttctggcccgaggcgtcttgcgcaacgtcggc
cgcgtgctcgaaatgccgctcggccaggtcgatcgcctcgccaagctcgtgccgcaaaat
ccggccgcgcccgtcagcctgaaacaggcgatcgactccgagccgcgcctcaaggaggcc
gccgaggccgagccgcgcgtcgccaaaatgctgcagatcgcgcagacgctggaagggctc
tactccaacgcctcgacccatgcggcgggcatcgtcatcggcgaccggccgctggagcag
ctggtgccgctctatcgcgatccgaaatccgacatgccggcgacccagttcaacatgaaa
tgggtcgagcccgcagggctcgtcaaattcgactttctcggcctcaaaacgctgaccacg
ctgtcgacctgcgtcaagctgcttcgccgccgcggcattgagattgaaatcgacaagatc
ccgctcgacgattccaaaacctacgccatgcttggccgcggcgagacgatcggcgtgttc
cagcttgaaagcgctggcatgcgccgggcgctggtcgacatgcatgccgaccgttttgag
gacatcatcgccctcgtcgcgctctaccggccgggccccatggcgaatatcccgcgctat
tgcgcggtgaaggcgggggaagaagaggccgactacatccaccccaagatcgaaggcgtg
ctgaaagaaaccttcggcgtcatcatctaccaggagcaggtgatgcagatcgcgcagatc
ctctccggctattcgctcggcgaggccgatcttctgcgtcgcgccatgggcaagaagatc
aaggcggagatggacgcgcagcgcgaccgctttctgcgcggcgcgatcgacaacggcctc
gccaaggcgaaggcgaatgaaatcttcgatctgctcgccaaattcgccgactatggcttc
aacaaaagccatgcggcggcctatgcgctgatcgcctatcagaccgcctggttcaaggcc
aattatccgctggagtttctcgccgcttcgatgacgctggacaaggccaacaccgacaag
ctggctgaattttccaatgaggcgcggcggctgaacggcgccgtcgagccgccctcgatc
cagcgttcgggggcggatttcgaagtttgcgccaatgacgccggcgagctccagatccgc
tatgcgctcggcgcgatcaagggcgtggggcagggccatgccgaagctctcgtcgccgcg
cggaacagcaagccgtttcgtgatttcgccgatttttcggcgcgcatcgatccgcgcgcg
attaacaagcgcatgctcgaaagcctcgtggccgctggggcgttcgatgagatggagccg
gatcgcgcccgcgtcttcgccgccatcgagacgattctggccagcgcccaccggcgcgac
gaggagcgccgcgcgggacagtcggcgttgtttggcgcgggcgcagaagatcgcatgccc
ctgccgaaagtcgcgccctggacgcttgcggaacggctgcggcgcgaattcgattcggtc
ggctttttcctgtcaggccatccgctcgacgcctacgccacgatcatgagccggctgcgc
gtgcagcgctggaccgaattttcgcgcgcggtgaaattgggcgcgaccggcggccggctc
gccgcaacggtgctcgaccggcaagagcgccgcaccaaatccggctccaagatgggcatc
gtgcagctgtccgatccatccggccaatatgaggcgatcctgtttcaggaaggcctcaac
caatatcgcgaccttctggaaaagggcgcctcgctgctgctcgtgctgcaggctgcggtc
gaaggcgatgaggtgcgcgcgcgcatcgtctcggccgagccgctcgaccatgcggcgagc
cgcgtacaaaagggtctccggattttcgtcgccgacgacaagccgctcgatcagatcaag
cagagcctgcgtccgcagggcgacggcgaggtcgccctgatcctgcagaccccggagtgc
gagatcgagctcaagctgcccggaaaatatggggtttccgcgcagtccgcgggagcgctg
aaggcgatcccgggcattcttgctgtggagcatgtctga
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