Methylocella silvestris: Msil_1905
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Entry
Msil_1905 CDS
T00802
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msl03032
]
Msil_1905
03400 DNA repair and recombination proteins [BR:
msl03400
]
Msil_1905
Enzymes [BR:
msl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Msil_1905
DNA replication proteins [BR:
msl03032
]
Prokaryotic type
DNA Topoisomerases
Msil_1905
DNA repair and recombination proteins [BR:
msl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Msil_1905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ACK50850
UniProt:
B8ENR4
LinkDB
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Position
complement(2072991..2075456)
Genome browser
AA seq
821 aa
AA seq
DB search
MVEPAAASPAFIPAEAEAYYGADSIKVLRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVD
NAIDEALAGHATRVTVTLNADGSVAVTDDGRGIPTDIHSEEGVSAAEVIMTQLHAGGKFD
QNSYKVSGGLHGVGVSVVNALSSWLKLRIWRDGKEHLIEFAHGDAVTPLKVTGPAPTHDG
KPKRGTEVTFQASPETFTKVDYDFATIEHRLRELAFLNSGVRIELTDARGAEVRSETLYY
DGGLEAFVRYLDRAKTPLIAKPILIKGEREAITVEVALWWNDSYHENVLPFTNNIPQRDG
GTHLAAFRAALTRQLTGYAERSGLLKREKVDLTGDDCREGLTCVLSVKAPDPKFSSQTKE
KLVSSEVRPAVEGLVNEMLGSWLEEHPQEARTVVGKVIEAGQAREAARKARELTRRKGAL
DISNLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRNREYQAVLPLRGKILNVERARF
DKMLSSQEIGTLITALGTGIGRDDFNVDKLRYHKIIIMTDADVDGSHIRTLLLTFFFRQM
RELIERGHLFIAQPPLYKVKRGGSEQYLKDERAREDYLIGNGLEGAVLRLADGVERSGAD
LRAIVEEARTVRQVLSATHSRYDRAVVEQAAITGALRPIGPEDEAGAEAIAAEIAGRLDA
LADDMERGWSGRVVNGGYVFSRLVRGVRQAATLDAGLLASSEARRLNEHAASLHDVFARP
AVFMRRADQSQASGPGELLSAVMAAGQKGISQMQRYKGLGEMNPEQLWETTLDRDARSLL
QVKIKEGDDADDIFVKLMGDVVEPRREFIQENALNVSNLDV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacccgccgccgcgtcgcccgccttcattcccgccgaggcggaagcctattat
ggcgccgattcgatcaaggtgctgcgcggcctcgacgccgtccgcaaacggccgggcatg
tatatcggcgacaccgacgacggctcgggcctgcatcacatggtctatgaggtcgtcgac
aacgccatcgacgaggcgctcgcgggccatgcgacgcgcgtcacggtgacgctcaacgcc
gacggctccgtcgccgtgacggatgacggccgcggcatcccgaccgacatccacagcgaa
gaaggcgtttccgcggccgaggtcatcatgacccagctgcatgcgggcggaaaattcgac
cagaattcttataaagtctcgggcggcctgcatggcgtcggcgtttcggtcgtcaacgcc
ctgtcgagctggctgaagctgcgcatctggcgcgacggcaaagagcatctgatcgaattt
gcccatggcgatgccgtgacgccgctcaaggtgacggggccggcgccgacccatgacgga
aagccgaaacgcggcaccgaggtgacctttcaggcctcacccgagaccttcaccaaggtc
gattatgattttgcgacgatcgagcaccgcctgcgcgagcttgccttcctgaattcgggc
gtccgcatcgagctcactgacgcgcgtggcgccgaggtccgctcggagacgctctattat
gacggcggccttgaggcctttgtgcgctatctcgatcgcgccaaaacgccgctcatcgcc
aaacccattctgatcaagggcgagcgggaggcgatcaccgtcgaggtcgcgctgtggtgg
aacgattcctaccatgaaaatgtgctgccctttacgaacaacatcccgcagcgcgacggg
ggcactcatctcgccgcctttcgcgcggccttgacgcgccagctcaccggctatgccgaa
cgctcgggccttctaaaacgcgaaaaggtggatctgaccggcgacgattgccgcgagggc
ttgacctgcgttctttcggtcaaggcgccggacccgaaattctcctcgcagaccaaggag
aagcttgtgtcctccgaggtgcggccggcggtcgagggcctcgtcaatgaaatgctcggc
tcctggctcgaggagcatccccaggaggcgcgcaccgtcgtcggcaaggtgatcgaggcg
gggcaggcgcgagaggcggcgcgcaaggcgcgcgaactcacccgccgcaagggcgcgctc
gatatctccaacctgcccggcaagctcgccgattgtcaggagcgcgatccggcgaagtcc
gaactctttctcgtcgagggcgattccgccggcggctcggccaagcagggccgcaaccgc
gaatatcaggcggtgcttcccttgcgcggcaagatcctcaatgtggagcgcgcccgcttc
gacaagatgctgtcctcccaggaaatcggcacgctgatcacagcgctcggcacaggcatc
ggccgcgatgatttcaacgtcgacaagctgcgctatcacaagatcatcatcatgaccgac
gccgatgtcgacggctcgcatatccgcactcttttacttacgttcttcttccgccagatg
cgcgaattgatcgagcgcggccatctcttcatcgcgcagccgccgctctacaaggtcaag
cgcggcggttcggagcaatatctgaaggatgagcgcgcccgcgaagattatctgatcggc
aatgggcttgagggcgccgtgctgcgcctcgccgacggcgtcgagcgctccggcgccgat
ctgcgcgcgatcgtcgaggaggcgcgcacggtgcggcaggtcctcagcgcgacacattcg
cgctatgaccgcgccgtcgtcgaacaggctgcgatcaccggggcgttgcggccgatcggt
cctgaggatgaggcgggagccgaggcgatcgccgccgagatcgccggccggctcgacgcg
ctggccgacgatatggagcgcggctggagcggccgcgtcgtcaatggcggctatgtgttc
agccggctggtgcgcggcgtgcggcaggccgcgacgctcgacgccgggctgcttgcctcc
agcgaggcgcgccgtctcaatgagcacgccgcctcgctgcatgacgtcttcgcgcggccg
gctgttttcatgcgtcgcgccgaccagagtcaggcctcggggccgggcgagcttttgagc
gctgtgatggctgcgggccagaagggcatctcgcagatgcagcgctacaaagggctcggc
gagatgaacccggagcagctatgggagacgacgctcgatcgcgacgcccgctcgctgttg
caagtcaagatcaaggaaggcgacgacgccgacgatatttttgtgaagctgatgggcgac
gtcgtcgagccgcgccgcgaattcatccaggagaatgcgctgaacgtgtcgaacctcgac
gtttga
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