Methylocella silvestris: Msil_1922
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Entry
Msil_1922 CDS
T00802
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msl03016
]
Msil_1922
Enzymes [BR:
msl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Msil_1922
Transfer RNA biogenesis [BR:
msl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Msil_1922
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ACK50867
UniProt:
B8ENT1
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All DBs
Position
2093474..2094007
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AA seq
177 aa
AA seq
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MPRLFTGIEIPPEVATDLSLMRGGIYGARWIDVENYHITLRFIGDIDDSSADDVHMALEQ
IRRKPFEVTLETLGSFGGDKPRAIVAKAKPAAPLVELQAQQERLLRRIGIAPEPRKFTPH
VTLARLRAASSMAVADYLSTRGFFFSRRFEASRFVLFSSRASTGGGPYVVEAAYPLG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctcttcaccggcatcgaaattccgccggaagtcgcgaccgatctgtccctg
atgcgcggcggcatttatggcgcgcgctggatcgatgtcgagaactaccacatcaccctg
cgcttcatcggcgacatcgacgattcctccgccgacgacgttcacatggcgctggagcag
atccgccgaaaaccgtttgaggtgaccctggaaacgctcggttctttcggcggggacaag
ccccgcgcgattgtcgccaaggcgaagccagcggcccccctcgtcgaattgcaggcgcag
caggagcggttgctgcgacggatcggcattgcgccggagccgcgcaaattcacgccgcat
gtgacgctggcgcggcttcgagcggcctcgtccatggcggtcgccgattatctgtcgacg
cgcgggtttttcttctcgcgccgcttcgaagccagccgcttcgtgctgttctcctcacgc
gcctcgacgggcggcggcccctatgtcgtcgaggcggcctacccgctgggatag
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