Methylocella silvestris: Msil_2580
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Entry
Msil_2580 CDS
T00802
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
msl
Methylocella silvestris
Brite
KEGG Orthology (KO) [BR:
msl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msl01002
]
Msil_2580
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msl01011
]
Msil_2580
Peptidases and inhibitors [BR:
msl01002
]
Cysteine peptidases
Family C82
Msil_2580
Peptidoglycan biosynthesis and degradation proteins [BR:
msl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Msil_2580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACK51503
UniProt:
B8EQ13
LinkDB
All DBs
Position
2815286..2817175
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AA seq
629 aa
AA seq
DB search
MKSASAQALCLALLLALAPAGAVRADPASSAAPQVSRADKKLSPHLAALSDIKKIPLPPL
PPESRIGAAPATAPQLAPQESQAALPEAAEFSAQAPTAPIPAGAPEAAPAAAPSGAADSP
LAPNAAAPVGETGAAIPDAAPLPPLNAAIKAALEARGEKDRIDRVSASRRREQDAVAAFY
AARDFAPLWSHEGNPIAEVRPALQRLQLAAEDGLSVRPPRFAATGSDEEIAGADIALSAA
IVSYARQASGARVDPRQISALIGLRPEVADPSVALATVSTAGQNAGAALLAFNPPQPAYQ
ALRAKLNETRRAAAPVARAAAIPTGPTLKVGMRDPRVPLIRSRLSLDGREGEPENLVYDT
QVASAVADFQKANGLPGSGQLNARTIALLSGGDQSRVEAEILANMERWRWMPRDMGESRI
EVNIPDYEVSVIENGAVISQNRVVVGKEDTPTPVFSNTMQFLIVNPYWTVPQSIIRKEMM
PKIAADPNYLHRMGYEAVWKNGKLGVRQPPGERNALGRIKFMFPNDYAVYLHDTPSRALF
EQHKRAFSHGCVRVDDPFRFAQSVLGKGWSEERVQKLIGGKERYVHLAKPLPIHLEYFTA
KVDPYGQLQLSEDIYGFSRKVRAALGLEG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgcctcggcgcaggcgctttgcctcgcgctgcttctggcgctcgcccctgcc
ggcgcggtcagagccgatcccgcgagctctgcggctccgcaggtttcgcgggctgacaag
aagctgtcgccgcatcttgccgctctgtccgatataaagaaaatcccgctgccgccgctc
ccgccggagtcgcggattggcgcggcgcccgcgaccgcgccgcagcttgcgccgcaagag
tcgcaggcggcgctgcccgaagccgcggaattttcggcgcaggctccgaccgcgcccatt
ccggccggcgcgccggaagcagccccagccgccgctccttccggcgccgccgattcgccg
ctcgcgccgaatgccgccgcgcctgtcggcgagaccggcgccgccatcccggacgctgcc
ccgctgcccccgctcaacgccgcgatcaaggcggcgctcgaggcgcgcggcgagaaggat
cgtatcgaccgggtctcggcttcgcgcaggcgcgagcaggacgccgtcgccgccttctat
gcggcgcgcgatttcgcgccgctttggtcgcatgagggaaatccgatcgccgaggtcagg
ccggcgttgcagcggcttcaacttgcggccgaggacgggctgtcggtcaggccgccgcgt
tttgccgcgaccggctccgacgaggagatcgccggcgccgatatcgcgctcagcgccgcg
atcgtatcctatgcgcgccaagcctcaggcgctcgggtcgatccgcgccagatttcggcg
ctgatcggtttgcgcccggaggtcgccgacccgtccgttgcgctggcgaccgtctcgacc
gccggccagaacgcgggagcggcgctgctcgcgttcaatccgccgcagccggcctatcag
gcgctccgggcaaagctcaacgagacgcggcgggcggcggcgcctgtcgcccgcgcggcg
gcgattccgacggggccgaccctgaaagtcgggatgcgcgatccacgcgtgccgctgatc
cgctcgcggctcagcctcgacgggcgcgagggcgagcccgaaaatctcgtctatgacacg
caggtcgcgagcgcggtcgccgatttccagaaggcgaacggcctgcccggctccggccag
ctgaacgcgcgcaccatcgccctgctctccggcggcgatcaatcccgcgtcgaggccgaa
atcctcgccaatatggagcgctggcgctggatgccgcgcgacatgggcgagagccgaatc
gaggtcaatatccccgattacgaggtttccgtcatcgaaaacggcgccgtcatctcgcaa
aatcgcgtcgtcgtcggcaaggaggacacgccgacgccggtgttctccaacacgatgcag
tttctgatcgtcaacccgtattggacggtgccgcagtcgattatccgcaaggaaatgatg
ccgaagatcgccgccgatccgaattatctgcatcgcatgggctatgaggcggtttggaag
aacggcaagctcggcgtgcgtcaaccgcccggcgaacgcaatgcgctcgggcgcatcaaa
ttcatgttccccaatgattacgcggtctatctgcacgacacgccgtcgcgcgcgctgttc
gagcagcacaagcgcgccttcagccacggttgcgtcagggtcgacgacccattccgcttc
gcgcagagcgtgctcggcaagggctggagcgaggaacgcgtgcaaaagctcatcggcggc
aaggagcgctatgtgcatttggcgaagccgctgccgatccacctcgaatatttcaccgcc
aaggtcgacccttacggccagctgcaattgagcgaagacatctatggattctcccgcaag
gtgagggcggcgcttgggcttgagggctga
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