Methylocella silvestris: Msil_3548
Help
Entry
Msil_3548 CDS
T00802
Name
(GenBank) Apolipoprotein A1/A4/E
Organism
msl
Methylocella silvestris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
ACK52437
UniProt:
B8ETT5
LinkDB
All DBs
Position
complement(3900034..3907017)
Genome browser
AA seq
2327 aa
AA seq
DB search
MARSPKIHDPAAEALLAIEEALNLRGGDPFGASEEPSVDAAAEASHSEKPALRGNGPRMP
STSEDPLLPSPGSSFAAAVAEASSGQIRRSASPANDDRHSAGEMLRKLQARPSRTPTIVA
AIASLAWVALTLGYLLAHREALFAGPEGSTLPVGALYFLTIAGPVVFFFITAMMIRRAQE
MRVTARSMTEVALRLASPETAATEQMVTLSQAIRREVASMGDGIERALARAGELETLVRS
EVSNLERSYSDNERRVRALIDELAAERDSVLANADRVRGAISQTHEAVSRDIETVSTRFS
ERVGAAAAEVGASLNAKGEEITNALSRGRDDLIESLSNHGNDLVGRLTQRGEAATADLAQ
ASASVAQTLDQRLAEINARLRDAQEALAADLGARGDSLSQRLAVVGAGIADTVSSRGDSL
AARLEETSGRLHEVVAVQGGALGDHLAEAGERFSRMIAERVSSARETLDQSGQSLVALFE
AGGGRLQSEFDRNGGDLQRNLLTVAESTAATLSAHTESLRGSLAHSVEETVRRLDDHANR
VHTHLSLTADDAIAAFAGRSEQLSEQLASTLESTLGALNDHSAFMSERLDSAAEQAATDF
AGRSEALHERLTATIDDTLGALAERSEQVAAGLDASSRRSAALFGDQTEGLQQRLSETLD
TLHTRLAATVEETLGALADRSGLVAEELDASSRRSAALLGDHAESLQHQIGATLEALDRH
AQDLGGRLGALSEHSLDAFVSQTESLHERLNAAINALDDHSNSISRRLAASAQESAGALA
AQTQTLQERLAAAVDTASERSDEIARRIADSTRDQTETLASRTDELHAQLGATIDAVDAH
LEEISRRLAVVSESSVGALAEQTAALQDRLSAVARTVNEHAGEISRRLASSARDSVGTLA
ERTQALEQRIEAALSLLNEKSDAIGERLASTAEQSADAVAGQSEALRERLGAAIAALTAH
NEEIARRVEAAAQQSAGALAGQADSLQERLGAVVAAIDEHSDAIAGRLAATADLSAGALA
ERTDALHERLGAVVGALDEHSIEMSERLEATAHYSIGAFAEHSEALHQRLNDTLAETLGA
LTQHTESMSGRLESTAQFTVNAFSGHAQSVHERLEATLSEALASLTAHTDDVSTRLSETA
RQSADALTSPVEALRERLAGAVAATLGALSDHAAEISEKLAATAANSAGALTSQTDALRA
TLSESLAALDAHLAEIGARLTSSADISANALGARTEALSERLALAVGETLGSLTKHADDV
NQRLNATVGETLLTLGAQTDRVNERLEATTQRSLGALASHTESLQTRLASTLGETLGALS
GYSDEMQDRLQGIGSQSLAAFADHTSGLEERLTLMLGEAFNTLTIQASQLTENLSARSQE
AVQAFAGETQALQESFDATAQQAAAAIGYHAGDLNDRFTETASQAIDAIAVHSERINEAL
SSRLAMFEETFLGHGGAVASNLSDQTERFTATLSDRLGAIENTLTVRGGDLNERLARRAG
ETARALEGQIGDFENRTAARAQEIGQTLQALTERFDAGFESRATALDAALSARAGELARM
LGEGSDNVIRALDGKAREIQATLASSAAALAQSLADRAAEIDATFAAQARSIATALDTRV
SEFETLIAGRLDLTASELESRGRAVAEAIAARTSEIGDTLGQHASDINAALDREHGHVAA
SLSGRAAEIRDLLTQATEDLDATLAGRAGEIGDALGVRVNEISLALADRLSDIEGALGGR
GEALHQGLLESAESLRDLFDRRGFDLVAALSARGGEIAEEMTNVGDLVTQTIESRGSAIV
QHLGAKQEELAEAIDRSAAHLRDAFEAGASASLGALIDANGKLGAEMNEVIDRLVAGSAS
LQEQISSANLNFAGVETTLGRRMDEFRTVLAAVSGEVARLNEAASETVREAGGLAETIAA
HRDSIASSADDLVRSQDQLDQSLGARRASLETLIGALDLRRRDFETMLSAFSGYMEQAFE
TVEGRARDVSAFMSESIGAAASEADQQLASVRASVVEGRERAAEAMRLACLEANAEIDGF
FSQSSERFQSAVSDLRDMARTIQDELATTRELLKTSVAELPQETAQQAASMRKIVADEIK
ALKELSDIVTRSGRSLDVSAAPAPAERPSVAPARRPSPPVRPEEPARASEPPAPIEPRRP
QNPAPTERSGWLSDLLARASTEETAPARPLRDLRPKALAPAPISSPPATTTQNTRPLEAI
SLDIAGMIDPDAFAEAWDRYRRGEPRPFFEQIYVGRGRQTFDEVRRRYRLNPEFRATIDR
YVQEFERLLNELDRDGADAAMTQNYLASETGMVYTMLAHASGRFGQG
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctctcccaaaatccacgatccggctgcggaggcgcttcttgccatcgaagaa
gcgctgaacctgcgcggcggcgatccctttggagcttcggaggagccctcggtcgatgcg
gctgcggaggcaagccacagcgaaaagccagcccttcgcggcaatgggccgcgcatgcct
tcaaccagcgaagacccgctgctgccctcgccgggatcgagctttgctgcggccgtcgcc
gaagcctcctccggccagatccggcgcagcgcatcgcccgccaatgacgaccgccattcg
gccggcgagatgctgcgcaagcttcaggcgcggccgagccggaccccgaccatcgtcgcc
gcgatcgcgtcgctcgcctgggtcgcgctgactctcggctatctgctggcccaccgcgag
gcgctgtttgccggcccggagggctcgacccttccggtcggcgcgctttatttcctgaca
attgccggaccggtcgtgttcttcttcatcaccgcgatgatgatccgacgcgcccaggag
atgcgggtcaccgcccgctctatgaccgaagtcgcgctgcggctcgcgtcgccggagacg
gcggcgaccgaacagatggtgacgctgtcgcaggcgatccggcgcgaggtcgcctcgatg
ggcgacggcatcgaacgggcgctggcccgcgccggcgagctcgagacgctggtgcggtcc
gaagtctccaatctggaacgctcctattccgataatgagcggcgcgttcgcgccctgatt
gacgagctcgcggcggagcgggactccgtgctcgccaacgccgaccgcgtccgcggggcg
atttcccagacccatgaggccgtctcgcgcgatatcgagacggtctcgacgcggttttcc
gagcgcgtcggcgcggcggcggccgaagtcggtgcgtcgctgaacgccaagggcgaggag
atcacaaatgcgctcagccgcggccgcgacgatctgatcgagagcctctccaaccacggc
aacgacctcgtcggccggctgacccagcgcggcgaggcggcgaccgccgatcttgcgcag
gcgagcgccagcgtcgcgcagacgctcgaccagcgcctcgccgagatcaacgcccggctg
agagacgctcaggaagcgctcgccgccgatcttggcgcgcggggagattccctctcccag
cggctcgccgtcgtcggcgcgggcattgccgacaccgtgtcctcgcgcggcgacagcctc
gcagcgcggcttgaggaaacaagcgggcgcctgcatgaggtggtggcggttcagggcggc
gcgctcggcgaccacctcgcggaagccggcgaacgcttcagccgaatgatcgcggaacgc
gtcagctccgcgcgcgagacgctcgaccagtcgggccaatccctggtcgcgctgttcgaa
gcgggcggcggccgcctgcagtcggaattcgaccgcaacggcggcgacttgcagcgaaat
cttctaacggtcgccgaatcgaccgctgcgaccctgtcagcgcataccgagagcctgcgc
ggaagcctcgcccattcggtcgaggaaacggtcaggcgtctcgacgatcacgccaaccgc
gtccatacgcatctgtcattgactgccgatgacgccatcgccgcttttgccggccgcagc
gagcagctgagcgagcagctcgcctcgacgctcgaaagcacgcttggcgcgctcaacgat
cattcggcgttcatgagcgaacggctggattctgccgccgaacaggcggcgacggatttc
gccggccgctccgaagcgctgcatgaaaggctgaccgcgacgatcgacgacacgctcggc
gcactcgccgaacgctccgaacaagtggccgccggactagacgcctcctcgcgccgctcg
gccgccctgttcggcgatcagaccgaaggattgcagcagcggctttcggaaacgctggac
acgctgcatacgcggctggcggcgacggtcgaggaaaccctcggcgcgctcgcggaccgc
tccgggctggtcgccgaagagctcgacgcgtcctcgcgccgctccgccgccctgctcggc
gatcatgcggagagcctgcagcatcagatcggcgcgacgctcgaagcgctggaccgccat
gcccaggatctcgggggacggctcggcgcgttgagcgagcattcgctcgacgctttcgtc
agtcagaccgaatctttgcacgaacgtctcaacgccgcgatcaacgccctcgacgatcat
tcgaattcgatcagccgccgcctcgccgccagcgcgcaggaatcggccggcgcactcgcc
gcccaaacgcagacgctgcaggagcgcctcgccgccgccgtcgacacggccagcgaacgg
tcggacgaaattgcccgccgcatcgccgacagcacgcgcgaccagaccgaaaccctcgcc
agccggaccgatgagttgcatgcgcagctcggcgcgaccattgacgcggtcgacgcgcat
ctggaggagatcagccgccgcctggccgtggtttcggaaagctccgtcggcgccctcgcc
gaacagacagcggctttgcaggaccggctcagcgcggttgcaaggacggtcaacgaacac
gccggcgagatcagccgccgactggcttcgagcgcgcgcgactcggtcggaaccctggcc
gagcgcacgcaggcgctggagcagcgcatcgaggccgcgctgagcctcctcaacgaaaaa
tcggacgccatcggcgaacggctcgcctcgactgcggaacagtcggctgacgccgtcgcc
ggccaatccgaggcgctgcgcgagcggctcggcgccgccatcgccgctttgacggcgcat
aatgaagagatcgcccgtcgcgtcgaggccgctgcgcagcaatcggccggcgcgcttgcc
ggccaggcggattcgctgcaggagcgccttggcgccgtcgtcgccgcgatcgacgagcat
tccgacgccatcgcggggcgcctcgcggccaccgcggatctgtcggcgggcgcgctcgcc
gaacggacggacgcgctgcacgaaagactcggcgccgtggtcggcgcgctcgacgagcat
tccatcgagatgagcgagcgcctcgaggcgaccgcgcattattccatcggcgccttcgcc
gaacacagcgaagcgctgcatcagcgcctcaacgacacgctcgccgagacgctcggcgcc
ctgacgcagcatacggaatcgatgagcggccgcctcgaatcgacggcgcagttcacggtc
aacgccttcagcggccacgcccaaagcgtgcatgaacggctcgaggcgacgctgtccgag
gcgctcgccagcctcaccgcacataccgacgacgtcagcacgcgcctgtccgagaccgcc
cgccagtcggccgacgcgctgacctctccggtcgaagcgttgcgcgagaggcttgcagga
gccgtcgcggcgacgctcggcgcgctgagcgaccacgccgccgaaatcagcgagaagctc
gcagcgaccgccgccaattccgccggcgcgctgacgagccagaccgacgccctgcgcgcg
acgctcagcgaatcgctggcggcgctcgacgcccacctcgccgagatcggcgcgcggcta
acgtcgagcgcggatatttccgcgaacgccctgggcgcccgcaccgaggcgctcagcgag
cggctcgccctcgctgtcggcgagacgctcggctccctgacaaagcatgcggatgatgta
aatcaacgccttaacgcgactgtcggcgagacgctgctcaccctcggcgcccagaccgac
cgcgtcaacgaacgccttgaggcgacgacgcagcgctcgctcggagccctcgctagccac
accgagtcgttgcagacaaggctggcttcgacgcttggcgagacgctcggcgcgctgtcc
ggctattcggatgagatgcaggatcgtctgcaagggatcggcagccagtcgctcgccgcc
ttcgccgaccatacgtcgggcctcgaggagcgcctgacgctgatgttgggcgaagccttc
aacacgctgacgatccaggcgagccagttgaccgagaacctctcggcgcgcagccaggag
gccgtgcaggctttcgccggcgagacccaggcgctgcaggaaagcttcgacgccacggcg
cagcaggccgcggccgccatcggctaccatgcaggcgacctcaacgaccgcttcacggaa
acggcctcgcaggcgatcgacgcgattgccgtccatagcgagcgcatcaatgaggcgctg
tcctcgcgcctcgcgatgttcgaggagacgttccttggtcatggcggcgcggtggcctcg
aatctgagcgaccagaccgagcgcttcacggcgacgctgtccgaccgtcttggcgcgatc
gagaacacgctgactgtgcgcggcggcgatctcaacgaacggctggcccggcgcgccggc
gaaacggcgcgggcgctcgaaggacagatcggcgacttcgaaaatcggaccgcagcgcgg
gcgcaagaaatcggacagacgctgcaggcgctgaccgaacgcttcgacgccggcttcgaa
tcgcgcgccacggcgctcgacgccgccctgagcgcgcgcgccggcgaactcgcccggatg
ctgggcgaaggcagcgacaatgtgatccgcgccctcgacggcaaggcgagggagatccag
gctacgctcgcctccagcgccgccgctctggcgcaaagcctggcggatcgcgcagcggag
atcgacgcgaccttcgcggcgcaggcgcgttcaatcgcgacggcgctcgatacgcgcgtg
tcggaatttgaaacgctgatcgcaggccggctcgacctcaccgcgagcgagctcgaatca
cgcggccgcgctgtggctgaagcgatcgcggcccgcacgagcgaaatcggcgatacgctc
gggcagcatgcaagcgacatcaatgcggcgctcgaccgcgagcacgggcacgtcgccgcc
tcgctgtcgggacgggcggccgaaatccgcgatctgctcacgcaggcgaccgaggatctc
gacgcgacccttgccggccgcgccggcgagatcggcgacgcgctcggcgtgcgcgtcaat
gagatcagcctggctctggccgatcggctctccgatatcgagggcgcgctcggcggacgc
ggcgaagctctgcatcagggtctgctcgaaagcgccgagagcctgcgcgacctgttcgac
cggcgcggcttcgatctcgtcgcagcgctctccgcgcgcggcggcgaaatcgccgaagag
atgacgaatgtcggcgatcttgtgacgcagacgatcgaaagccgcggctcggccatcgtg
cagcatcttggcgccaagcaagaggagctcgccgaggccatcgaccgctcggcggcgcat
ctgcgcgacgctttcgaggccggcgcctccgcatcgctcggcgcgctgatcgacgccaat
ggcaagctcggcgcggaaatgaatgaagtgatcgaccgcctcgtcgccggcagcgcctcg
ctgcaggagcagatctcgagcgcaaacctcaattttgccggcgtcgagacgacgctcggc
cggcgcatggatgaattccggaccgtgctcgccgccgtttcgggcgaagtcgcgcggctg
aacgaagccgccagcgaaacggtgcgcgaggcgggcggccttgccgaaacgatcgcggcg
caccgggacagcatcgcttcttccgcagacgatctcgtccgctcgcaggaccaactcgat
caatccctcggcgcgcgccgcgcctcgctcgaaacgctgatcggcgcgctggatctgcgc
cgtcgcgattttgaaacgatgctgagcgccttctcgggatatatggagcaggccttcgaa
acggtcgaaggccgggcgcgcgacgtcagcgcctttatgtccgagagcatcggagccgcc
gccagcgaggcagaccagcaattggccagcgtccgcgccagtgtcgtcgagggccgcgaa
cgcgccgctgaggcgatgcggctcgcctgcctggaggccaacgccgaaatcgacggcttc
ttcagccagagctcggagcgcttccagtcggcggtcagcgacctgcgcgacatggcgcgg
accatccaggacgaactcgcgacgacgcgcgaactcttgaagacgagcgtcgccgaactg
ccgcaggaaacggcgcagcaggccgcgtcgatgcgaaagatcgtcgccgacgaaatcaag
gcgctgaaggaattgagcgacatcgtcacccgctccggccgttcgctcgacgtctcggcg
gcgcctgcgccagccgaacggcccagcgtcgcgccggcgcgccgcccgtcgccgccagtt
cgtccggaagagcccgcgcgggcatccgagccgccggcgccgatcgagccgcgccgcccg
caaaatccggcgcctactgagcgcagcggatggctctcggacctgctcgcgcgcgcctcg
accgaagagaccgcgcccgcgcgccctctgcgtgatctgcggccgaaggccctcgcgccg
gcgccgataagttctccgcccgcgaccacaacgcaaaacaccaggccgctcgaagcgatc
tcgctcgacatcgccggaatgatcgaccccgacgccttcgccgaggcgtgggatcgctat
cgccgcggcgagccgcgacccttcttcgagcaaatctatgtcggccggggccgccagacc
ttcgatgaggtgcgccggcgctaccggctcaatcccgagttccgcgcgacgatcgaccgt
tatgtgcaggaatttgaacggctgctcaacgaactcgatcgcgacggcgccgacgccgcc
atgacgcagaactatctcgcctccgaaaccggcatggtctacaccatgctggcgcatgcc
tcgggccggttcggtcagggataa
DBGET
integrated database retrieval system
