Mycolicibacterium smegmatis MC2 155: MSMEG_1512
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Entry
MSMEG_1512 CDS
T00434
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm00521
Streptomycin biosynthesis
msm00523
Polyketide sugar unit biosynthesis
msm00525
Acarbose and validamycin biosynthesis
msm00541
Biosynthesis of various nucleotide sugars
msm01100
Metabolic pathways
msm01110
Biosynthesis of secondary metabolites
msm01250
Biosynthesis of nucleotide sugars
Module
msm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSMEG_1512 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSMEG_1512 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MSMEG_1512 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSMEG_1512 (rfbB)
00525 Acarbose and validamycin biosynthesis
MSMEG_1512 (rfbB)
Enzymes [BR:
msm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MSMEG_1512 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
ABK70086
UniProt:
A0QSK6
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Position
complement(1602962..1603957)
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AA seq
331 aa
AA seq
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MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVADRIRLVQGDITD
AALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHVST
DEVYGDLELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSNNYGP
YQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGRTYLIGA
ECERNNLTVMRTILKLMGRDPDDFDHVTDRAGHDLRYAIDPSTLQDELGWAPKHTDFEAG
LTDTIDWYRANESWWRPLKDTVEAKYQERGQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcggctattggtcaccggcggcgcggggttcatcggcgccaacttcgtgcatcttgcc
ctgcgcgaggcgcgcaccagctcgatcacggtgctcgacgcgctgacctacgcgggcagc
cgcgaatcgctggcgccggtggccgatcggatccggctcgtgcagggtgacatcaccgac
gcggcactcgtcggtgatctggtcgccgagtcggacgcggtcgtgcacttcgcggccgag
acgcatgtggacaacgccctggcggatccggagccgttcctgcactccaacgtcgttggc
acgtacaccatcctcgaggcggtgcgcaggcacaacgtgcggctgcaccatgtgtcgacc
gacgaggtgtacggcgatctggaactcgacaacccggcccgtttcaacgagaccacgccg
tacaacccctcgagcccctactcgtcgaccaaggccgccgcggacctgctggtgcgcgcg
tgggtgcggtcgtacggcgtgcgggccacgatctcgaactgctccaacaactacgggccg
tatcagcacgtggagaagttcatcccgcgccagatcaccaacgtgctgacgggtcggcgg
cccaagctgtacggcgcaggcgccaatgtgcgcgactggatccatgtcgacgaccacaac
agcgcggtctggcggatcctcaccgacggcacgatcggccgcacatacctgatcggtgcc
gagtgcgagcgcaacaacctgaccgtgatgcgcacgatcctgaagttgatgggccgcgat
cccgacgacttcgatcacgtcaccgaccgcgccggccacgacctgcgctacgcgatcgat
ccttcgacgctgcaggacgaactgggctgggctcccaaacacaccgatttcgaggcgggc
ctgaccgacacgatcgactggtaccgcgccaacgaatcctggtggcggccgctgaaagac
accgtcgaagcgaagtaccaggagcgtggccagtga
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