Mycolicibacterium smegmatis MC2 155: MSMEG_1784
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Entry
MSMEG_1784 CDS
T00434
Name
(GenBank) type I topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msm03032
]
MSMEG_1784
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_1784
Enzymes [BR:
msm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSMEG_1784
DNA replication proteins [BR:
msm03032
]
Prokaryotic type
DNA Topoisomerases
MSMEG_1784
DNA repair and recombination proteins [BR:
msm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSMEG_1784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABK71317
UniProt:
A0QTB9
LinkDB
All DBs
Position
complement(1868641..1869657)
Genome browser
AA seq
338 aa
AA seq
DB search
MRLRRSVVDGPGIKRIRRGRGFSYEKPDGQAVTDRKVLQRIDDLVIPPAWKTVWICPHAS
GHIQAVGTDVAGRRQYLYHPQWQQERSEEKFDRVLEMSTGLHDWRQHVAVDLARRGLRRD
RVLALGLRLLDLGYFRAGGEKYAEENNSFGIATLQCEHVSVSSGAVEFDYPAKSGVRRTL
LVEDDDVVRAVRALQRHRKRGERFLAYQDSADWVEVHADDLNLRFKEMVGEDYTVKDLRT
WHGTVLAAEAFVDADPPVDPKVVKRVESAVMREVSEGLGNTPAVARSAYVDPRVVQAYRN
GITIQSAVRRAERVPWAGERQSVLDRATARLIRKAARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgtcgaagcgtcgtcgacggcccggggatcaagcggatccgcaggggccgc
ggcttcagctatgaaaagcccgacggacaggcggtaactgatcgcaaggtgctgcagcgc
atcgacgatctcgtcatcccaccggcgtggaagacggtgtggatctgcccccatgcctcc
ggccacatccaggctgtcggcaccgatgtcgccggcaggcgccagtacctgtaccacccg
cagtggcagcaggagcgcagcgaggagaagttcgaccgtgtactggaaatgtctacaggg
cttcacgattggcggcagcatgtggcagtcgacctcgcgcggcggggcctgcgacgcgac
cgggtgctggcactggggctgcgcctgctcgacctcgggtacttccgcgcgggaggcgag
aaatacgccgaggagaacaactcgttcggtatcgcgacactgcagtgcgaacacgtgagc
gtgagcagcggcgcagtggagttcgactatccggctaagagcggggtgcggcgtacgttg
ctcgtcgaggacgacgacgtggtccgtgccgtgcgggcactgcagcgacaccgcaagcgc
ggggaacgttttctcgcctaccaggattcggccgattgggtggaggtccatgccgacgac
ctcaatcttcgcttcaaagagatggtcggcgaggactacacggtcaaggacctgcgcacc
tggcacggtacggtgctggccgccgaggcgttcgtcgacgccgatccgccggtggatccc
aaagtggtcaagcgcgtcgagtcggcggtgatgcgggaggtctccgaggggctggggaac
acccctgcggtcgcgcgcagcgcctacgtcgacccacgggtggtgcaggcctaccgcaac
ggcatcacgatccagtccgcggtgcgccgggccgagcgtgtcccgtgggctggcgagcgc
cagagcgtgctggaccgggcaacggcccggctgatccggaaagccgcccgcggttga
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