Mycolicibacterium smegmatis MC2 155: MSMEG_1978
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Entry
MSMEG_1978 CDS
T00434
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSMEG_1978 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msm03019
]
MSMEG_1978 (groL)
03110 Chaperones and folding catalysts [BR:
msm03110
]
MSMEG_1978 (groL)
03029 Mitochondrial biogenesis [BR:
msm03029
]
MSMEG_1978 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msm04147
]
MSMEG_1978 (groL)
Enzymes [BR:
msm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSMEG_1978 (groL)
Messenger RNA biogenesis [BR:
msm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSMEG_1978 (groL)
Chaperones and folding catalysts [BR:
msm03110
]
Heat shock proteins
HSP60 / Chaperonin
MSMEG_1978 (groL)
Mitochondrial biogenesis [BR:
msm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSMEG_1978 (groL)
Exosome [BR:
msm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSMEG_1978 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MSMEG_1978 (groL)
Exosomal proteins of breast cancer cells
MSMEG_1978 (groL)
Exosomal proteins of colorectal cancer cells
MSMEG_1978 (groL)
Exosomal proteins of bladder cancer cells
MSMEG_1978 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABK75509
UniProt:
A0QTV4
I7FA39
LinkDB
All DBs
Position
2059864..2061513
Genome browser
AA seq
549 aa
AA seq
DB search
MAKELRFNSDARARLEQGVNALADAVKVTLGPKGRNAILEKLTGPPTITNDGVTIAREIQ
LRDPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGLAAVEAGANPMRVRRGIE
RTVPVVVESLRSHSVEVGSSSDLRRIAALAASDDEAIGDVIAAAVEHVGKTGVVTTEESD
TLGMAVDVVDGIEFDHGYTSGYMVTDPERMEAVLDNPLILLTNKKISQVQEIMPTLEVAK
RADRPLVVIAEDVDGPALQLLVGGNMHKTMQSVVVRAPGFGHRRVAELEDLAVALGGHVI
AKDTGIDLGEVAREHLGSCDRLTATESDTTIVGPRGHQNLVDARVAQLEVQRERARIDAD
RDILDLRIARLTGRVAVIRVGGATSVELKERMLRVEDALAATRAALEAGIVSGGGTALAQ
AHRVLDAVELVGDEAIGRDVVRRALSEPLRWIAFNAGFEGGDVVDVVADLPLGHGFNALT
GEYGDMFEEGIIDPFKVTRAALESAASIAALLITTETAVVEEILGQPGAIMAPGFGDLAE
GMVRPSNIY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaactgcggttcaactccgatgcacgcgctcgtctcgaacaaggtgtcaac
gccctcgccgacgcggtgaaggtcaccctcggcccgaaggggcgcaacgccatcctggag
aaactgaccggtccacccaccatcaccaacgacggtgtgaccatcgccagggagatccaa
ctgcgtgatcccttcgccaacatgggtgcccagttggtcaaggaggtggcgatgaagacc
aacggcgtggtcggtgacggcaccaccaccgccaccgtgttggcgcaggcgatggttcgc
gagggcttggcggccgtcgaggccggcgccaacccgatgcgcgtgcgtcgcggcatcgaa
cgcaccgtgccggtggtcgtcgaatcgctgcgcagccacagcgtggaggtcggcagcagc
agcgacctgcgtcgtatcgccgcgctcgcggccagtgacgacgaagcgatcggcgacgtc
atcgcggccgccgtcgagcacgtcggcaagaccggcgtggtcacgaccgaggagagtgac
accctgggcatggcggtcgacgtcgtcgacggcatcgagttcgaccacggatacacatcc
ggctacatggtgaccgaccccgagcgcatggaggcggtgctcgacaatccgctgatcttg
ttgaccaacaagaagatcagtcaggtgcaggagatcatgcccaccctcgaggtggccaag
cgcgccgaccgcccgctcgtggtgatcgccgaggatgtcgacgggccggcactgcaactg
ctggtcggcggaaacatgcacaagaccatgcaatccgtggttgtgcgtgcgcccggcttc
ggacaccgccgggtcgccgaactcgaggacctggccgtcgcgctcggcgggcacgtcatc
gcgaaggacaccggcatcgacctgggcgaggtggcccgcgagcatctgggatcgtgcgac
cgtctcaccgccaccgaaagcgacaccaccatcgtcggtccgcgcgggcatcagaacctt
gtcgacgcccgtgtcgcgcaactggaggttcagcgcgagcgggccaggatcgacgccgat
cgggacatcctcgacctgaggattgcccggctcacgggacgagtggcagtgatccgcgtc
ggcggtgcgaccagcgtcgaactaaaggaacgcatgctccgggtcgaggacgccctcgcg
gcaaccagggcggcgctggaagccggcatcgtctcgggtggcggtaccgcactcgcgcag
gcgcaccgggtcctcgacgctgtcgagctcgtcggcgacgaggcgatcggccgcgacgtg
gttcgtcgtgcattgtcagagccgttgcgctggatcgccttcaacgccggcttcgaagga
ggcgatgtcgtcgatgttgtcgccgatctaccgctcggacatggcttcaatgcactcacc
ggcgagtacggcgacatgttcgaggaaggaatcatcgacccgttcaaggtgacccgcgcc
gcgctggagagtgccgcctcgatcgccgcgctgctgatcaccaccgagaccgcggtggtg
gaggagatcctcggtcaaccgggcgccatcatggcgcccggcttcggcgatctcgccgaa
ggcatggtccgcccgtccaacatctactga
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