Mycolicibacterium smegmatis MC2 155: MSMEG_2685
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Entry
MSMEG_2685 CDS
T00434
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSMEG_2685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msm03019
]
MSMEG_2685
Messenger RNA biogenesis [BR:
msm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MSMEG_2685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ABK74200
UniProt:
A0QVT2
LinkDB
All DBs
Position
2762206..2763882
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AA seq
558 aa
AA seq
DB search
MSAELAPPPPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPGHDEPGVDLI
LPDLRHIEDRLDEIEALVVTHAHEDHIGAIPFLLKLRPDIPVVGSKFTIALVREKCREHR
LKPKFVEVAERQSSQHGVFECEYFAVNHSIPGCLAVAIHTGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEHPGVSPSESEVGPTLHRLIRGAEGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGYLKVDDSDILDIAAAEMMPPDRV
VLITTGTQGEPMAALSRMSRGEHRSITLTSGDLIILSSSLIPGNEEAVYGVIDSLSKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRHLRANAALAASTGVPPENI
VLAENGVSVDLVAGRASISGAVTVGKMFVDGLITGDVGDATLGERLILSSGFVSITVVVH
RGTGRPAGPAHLISRGFSEDPKALEPVAQKVERELEALAADNVTDPTRIAQAVRRTVGKW
VGETYRRQPMIVPTVIEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaactcgcgccgccaccaccgctcgctccgggcggactgcgtgtcaccgcc
ctgggcggtatcagtgagatcggccgcaacatgacggttttcgagcatctcggccggttg
ctcatcgtcgactgcggcgtgttgttccccggacatgacgagcccggcgtcgacctgatc
ctgcccgatctgcgtcacatcgaggaccggctcgacgagatcgaggcgctcgtggtcacc
cacgcgcacgaggaccacatcggcgcgatcccgttcctgctcaagctgcgtcccgacatt
ccggtcgtcggctcgaagttcacgatcgccctggtgcgcgagaagtgccgcgaacaccgc
ctcaaaccgaagttcgtcgaggtcgccgagcggcagagcagccaacacggcgtcttcgag
tgcgagtacttcgcggtgaaccactcgatccccggttgcctcgcggtcgcgatccacacc
ggcgcgggcaccgtgctgcacacgggcgacatcaaactcgaccagttgccgctcgacggg
cgccccaccgacttgccgggcatgtcgcgcctcggcgacgccggcgtcgacctgttcctg
tgcgattccaccaactccgagcacccgggtgtcagcccgtcggagagcgaggtggggccg
acgctgcaccgcctgatccgcggtgccgagggccgcgtgatcgtggcgtgcttcgcgtcg
aacgtcgaccgcgtgcagcagatcatcgacgccgcggtggccctcggccgccgcgtgtcg
ttcgtcgggcggtcgatggtgcgcaacatggggatcgcgcgtgagctgggctacctgaag
gtcgacgactccgacatcctcgacatcgccgcggccgagatgatgcccccggaccgggtt
gtgttgatcaccacgggaacccagggcgagcccatggccgcgttgtcgcgcatgtcgcgc
ggcgagcaccgcagcatcacgctgacctccggtgacctgatcatcctgtcctcgtcgctg
atcccgggcaacgaggaagcggtgtacggcgtgatcgactcgctttccaagatcggcgcg
cgagtggtcaccaatgcccaagcgcgcgtgcatgtttcgggtcacgcctacgccggcgag
ctgttgttcctctacaacggcgtgcgtccgcgcaacgtcatgcccgtgcacggcacatgg
cggcacctgcgggccaacgccgcactggccgccagtaccggcgtgccgcccgagaacatc
gtgctggccgagaacggcgtgagcgtcgacctcgtcgcgggcagggcgtcgatctccgga
gcggtgacggtcggcaagatgttcgtcgacgggctcatcacgggcgacgtcggcgacgcg
acactgggcgaacgtctcatcctctcatcgggtttcgtgtccatcacggtcgtcgtgcac
cgcggcacgggccgcccggccggcccggcgcacctgatctcgcgcggattctccgaggat
cccaaggcgctggaaccggtggcgcagaaggttgagcgcgaactcgaggctctggccgcc
gacaacgtgaccgatccgacgcgcatcgcgcaggcggtccgccgcacggtcggcaagtgg
gtgggcgagacctaccgcaggcagccgatgatcgtcccgaccgtcatagagatctga
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