Mycolicibacterium smegmatis MC2 155: MSMEG_2758
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Entry
MSMEG_2758 CDS
T00434
Name
(GenBank) sigma factor MysA
KO
K03086
RNA polymerase primary sigma factor
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MSMEG_2758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msm03021
]
MSMEG_2758
Transcription machinery [BR:
msm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MSMEG_2758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Mo25
Motif
Other DBs
NCBI-ProteinID:
ABK71305
UniProt:
A0QW02
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(2826225..2827625)
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AA seq
466 aa
AA seq
DB search
MAATKASPATEEPVKRTATKTPAKKAPAKRAAKSAAAKAGGKAPAKKAPAKRAAKGTAAK
PEDGVTDDLEVTDDLEAEPGEDLDVEDTDLELDDLDSDDDTAVEDEEEEADAATPAVATA
KAADDDIDEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLN
AEEEVELAKRIEAGLYATQKLAELAEKGEKLPVQQRRDMQWICRDGDRAKNHLLEANLRL
VVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQ
ARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPIS
LDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLT
DGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacaaaggcaagcccggcaaccgaagagccggtgaagcgcaccgctaccaag
acccccgccaagaaggccccagccaagcgggcagccaagagcgccgcggcgaaagccggc
ggcaaggcccccgccaagaaagccccggccaagcgggccgccaaaggcaccgctgccaag
cccgaggacggcgtcaccgacgaccttgaggtgaccgacgatctcgaggctgagcccggc
gaggatctcgacgtcgaagacaccgacctggaactcgacgacctcgactccgacgacgac
accgcagtcgaggacgaggaagaagaagctgatgccgcgacgcccgccgtcgcgaccgcg
aaggccgccgacgacgacatcgacgagccgtccgagaaggacaaggcgtccggcgacttc
gtgtgggacgaggaagagtccgaggccctgcgacaggcacgcaaagacgccgagctgacc
gcatcggccgactcggttcgcgcctacctcaagcagatcggcaaggtggccctgctcaac
gccgaagaagaggtggagctggccaagcgcatcgaggcgggtctctacgccacgcagaag
ctggccgaactcgccgagaagggcgagaagctgccagtgcagcagcgccgcgacatgcag
tggatctgccgcgacggcgaccgcgccaaaaaccatctgctggaggcgaacctgcgcctc
gtggtgtcgctggccaagcgctacaccggccgcggcatggcgttcctcgacctcatccag
gaaggcaacctgggcctgatccgtgcggtcgagaagttcgactacaccaagggctacaag
ttctcgacctacgccacgtggtggatccgccaggccatcacgcgcgccatggccgaccag
gcccgcaccatccgtatcccggtgcacatggtcgaggtgatcaacaagctcggccgtatc
cagcgtgagctgctgcaggacctgggccgcgagcccacgcccgaagagctcgccaaggag
atggacatcacgcccgagaaggtgctggagatccagcagtacgcgcgtgagcccatctcg
ctggaccagaccatcggcgacgagggtgacagccagctcggtgacttcatcgaggacagc
gaggcggtcgtggccgtggacgccgtgtcgttcacgctgctgcaggaccagctgcagtcc
gtgctggagacgctgtccgagcgtgaggccggcgtggttcgtctgcgcttcggcctgacc
gacggccagccgcgcacgctcgacgagatcggccaggtctacggcgtcacgcgtgagcgc
atccgccagatcgagtccaagaccatgtcgaagctgcgccacccgagccgttcgcaggtg
ctgcgcgactacctggactag
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