Mycolicibacterium smegmatis MC2 155: MSMEG_3839
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Entry
MSMEG_3839 CDS
T00434
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm03030
DNA replication
msm03410
Base excision repair
msm03420
Nucleotide excision repair
msm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSMEG_3839
03410 Base excision repair
MSMEG_3839
03420 Nucleotide excision repair
MSMEG_3839
03440 Homologous recombination
MSMEG_3839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msm03032
]
MSMEG_3839
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_3839
Enzymes [BR:
msm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSMEG_3839
DNA replication proteins [BR:
msm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MSMEG_3839
DNA repair and recombination proteins [BR:
msm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MSMEG_3839
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSMEG_3839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
HHH_2
CNV-Replicase_N
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ABK71724
UniProt:
A0QYZ2
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(3908769..3911495)
Genome browser
AA seq
908 aa
AA seq
DB search
MSPAKTATKKTPAKAADDTPTLMLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTAM
LINLLRDEQPTHIAAAFDVSRQTFRKDKYPEYKEGRSATPDEFRGQIDITKEVLGALGIT
VLAEPGFEADDIIATLATQAEQEGYRVLVVTGDRDSLQLVSDQVTVLYPRKGVSELTRFT
PDAVVEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIVEYGSLQALVDNVDAV
KGKVGDALRANLSSVILNRELTDLIRDVPLPQTPDTLRMQPWNRDQIHRLFDDLEFRVLR
DRLFETLVAVEPEVEHGFDVRGRALEPGELAAWLSEHSLGSRFGVAVVGTHKAYDADATA
LAIVAADGDGRYIDTSTLTPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLRGVT
SDTALAAYLVRPGQRSFTLDDLAVRYLHRELRAETPEQQQLSLLDDSDGVDEQAVQTVIL
RACAVLDLADALDQELARIDSLSLLSRMELPVQRTLAEMEHAGIAVDLGMLEQLQSEFAD
QIRDAAEAAYSVIGKQINLGSPKQLQAVLFDELEMPKTKKTKTGYTTDADALQSLFEKTG
HPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGEGYAELMTADYSQIEMRIMAHLSRDAGLIEAFNTGEDLHSFVASRA
FSVPIDEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTEEAKVQMEQYFDRFGGVRDY
LRDVVDQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI
NVDQAIKDAGLRSRILLQVHDELLFEVSEGEQGELEQLVREHMGNAYPLDVPLEVSVGYG
RSWDAAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgccaagaccgcaaccaagaagacaccggccaaagccgctgacgacacgccc
accctgatgttgctggacggcaactcgctggccttccgggcgttctatgcgttgcccgcc
gagaacttcaagacgcagagcggcctgaccaccaacgcggtgtacggcttcaccgccatg
ctcatcaacttgctgcgtgacgagcagcccacgcacatcgccgcggcgttcgacgtgtcc
cggcagacgttccgcaaggacaagtaccccgagtacaaggagggccgctcggcgacgccc
gacgagttccgcgggcagatcgacatcaccaaagaggtgctcggggccctcggcatcacg
gtgctcgccgaacccgggttcgaggccgacgacatcatcgccacgctcgccacgcaggcc
gagcaggagggctaccgcgtcctggtggtcaccggcgaccgtgactcgctgcagctggtg
agcgaccaggtcaccgtgctctacccgcgcaagggtgtcagcgagctcacccggttcacg
cccgacgccgtggtggagaagtacggcctcacgccgcagcaataccccgacttcgcggcc
ctgcgcggcgacccgagcgacaacctgcccggcatccccggcgtgggggagaagaccgcc
accaagtggatcgtcgagtacgggtcgctgcaggcgctggtcgacaacgtcgacgcggtc
aagggcaaggtcggcgacgcgctgcgggccaacctgtcgagcgtcatcctcaaccgcgag
ctcacggatctgatccgggacgtgccgctcccgcagacccccgacacgctgcgcatgcag
ccgtggaaccgcgaccagatccaccggctgttcgatgacctggagttccgggtcctgcgc
gaccgcctgttcgagacgctggtcgcggtcgagccagaggtcgagcacggtttcgacgtg
cgcggccgcgcgctggagcccggtgagctcgccgcgtggctctccgagcacagcctcggc
agccggttcggcgtcgccgtcgtcggcacccacaaggcgtacgacgccgatgcgaccgcg
ctcgcgatcgtcgcggccgacggcgacggccgctacatcgacacctcgacgctgacgccc
gaggacgaggccgcgctggcgtcgtggctcgccgatccgggcccgccgaaggcgctgcac
gaggccaagctcgcgatgcacgatctggccgggcgcggctggacgctgcggggcgtcacg
tcggacaccgcgctcgcggcgtacctggtgcggcccgggcagcgcagcttcaccctcgac
gacctcgcggtgcgctacctgcatcgcgaactgcgcgcggaaacccctgagcagcagcag
ctttcactgctcgacgattctgacggcgtcgacgagcaggccgtgcagaccgtgatcctg
cgggcctgcgccgtgctggacctggccgacgcgctcgaccaggagctcgctcgcatcgac
tcgctgtcgctgctgagccgcatggagctgccggtccagcggacactggccgagatggag
catgccggcatcgcggtcgacctcggcatgctcgaacagctgcagagcgagttcgccgat
cagatccgcgacgcggccgaggccgcctactcggtgatcggcaagcagatcaacctcggt
tcgcccaaacagttgcaggccgttctgttcgacgagctggagatgccgaagaccaagaag
accaagaccggttacaccaccgacgccgacgcgctgcaatcgctgttcgagaagaccggc
catccgttcctgcagcatctgctggcgcaccgcgacgccacccgtctcaaggtgaccgtc
gacgggctgctcaactcggtggcctccgacgggcgcatccacacgacgttcaaccagacc
atcgccgcgaccggccggctgtcgtccaccgagccgaacctgcagaacatcccgatccgt
accgaggccgggcgccggatccgtgacgcgttcgtggtgggcgagggttacgccgagctc
atgaccgccgactacagccagatcgagatgcggatcatggcgcacctgtcgcgcgatgcg
ggcctcatcgaggcgttcaacaccggtgaggatctgcactcgttcgtcgcgtcgcgggcg
ttctcggtgccgatcgacgaggtgacgcccgagttgcgccgccgcgtgaaggccatgtcc
tacggcctggcgtacggcctcagtgcctacgggctcgcgcaacagctcaagatctccacc
gaagaggcgaaggtgcagatggagcagtacttcgaccggttcggcggggtgcgtgactat
ctgcgtgacgtggtcgaccaggcccgcaaggacggttacacctcgacggtgctgggccgc
aggcggtatctgcccgagctcgacagcagcaaccgccaggtccgcgaggcggccgagcgt
gcggcgctcaacgccccgatccagggcagcgcggccgacatcatcaaggtcgcgatgatc
aacgtcgaccaggcgatcaaggatgctgggctgcgctcgcggatcctgctgcaggtccac
gacgagttgctgttcgaggtctcggaaggggagcagggggagctcgaacagctggtccgt
gagcacatgggcaacgcgtatccgctcgacgtgccacttgaggtgtcggtggggtacggc
cgcagctgggacgccgcggctcactga
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