Mycolicibacterium smegmatis MC2 155: MSMEG_4958
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Entry
MSMEG_4958 CDS
T00434
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm00300
Lysine biosynthesis
msm00470
D-Amino acid metabolism
msm01100
Metabolic pathways
msm01110
Biosynthesis of secondary metabolites
msm01120
Microbial metabolism in diverse environments
msm01230
Biosynthesis of amino acids
Module
msm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSMEG_4958 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSMEG_4958 (lysA)
Enzymes [BR:
msm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MSMEG_4958 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABK70119
UniProt:
Q9X5M1
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All DBs
Position
complement(5055070..5056494)
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AA seq
474 aa
AA seq
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MNAHPAGPRHAEELHHADVPDKPQSPDEIMLLAPNVWPRNLVRGADGVVTIAGVPVTDLA
AKFGTPLFVIDEDDFRTRCRDIAAAFGGGQYVHYAAKAFLCSEIARWVDEEGLSLDVATG
GELAVALHAGFPASRITVHGNNKSVAELTAAVQAGVGHVVLDSEIEIERLDQIAGAAGVV
QDVLVRVTVGVEAHTHEFISTAHEDQKFGLSLATGAAMNAIRRVFATDNLRLVGLHSHIG
SQIFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMSIVDLGGGLGISYLPHDDPPPMKEL
ADKLLEIVRTESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSQTAHRRYVSV
DGGMSDNIRTSLYAAQYDARLVSRVSDAPPALARIVGKHCESGDIVVRDTWVSDDIAPGD
LIGVAATGAYCYSMSSRYNLLCRPAVVAVADGQARLVLRRETVEDLLSLEVKGQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcatccggccgggcccaggcacgccgaggaactgcaccacgcggatgtgccc
gacaagccgcagagcccggacgagatcatgctgctggccccgaacgtgtggccgcgcaac
ctggttcgcggtgccgacggggtggtgacgatcgccggggtgccggtgaccgacctggcc
gcgaagttcggcacaccgctgttcgtgatcgacgaggacgacttccgcacccgctgccgc
gacatcgccgcggcgttcggcggcggccagtacgtgcactacgcggccaaggcgttcctg
tgctcggagatcgcgcgctgggtcgacgaggaaggcctgtccctcgacgtcgcgaccggg
ggagaactggccgtcgcgctgcacgccggcttcccggcctcgcggatcacggtgcacggc
aacaacaaatccgtcgccgaactgaccgccgcggtgcaggcaggcgtgggccacgtcgtg
ctggactccgagatcgagatcgagcgcctcgatcagatcgccggtgcggcaggcgtggtc
caggacgtgctggtgcgcgtcaccgtgggcgtggaggcccacacccacgagttcatctcg
accgcgcacgaggatcagaagttcggtttgtcgctggccacgggtgcggcgatgaacgcg
atccgccgggtcttcgcgaccgacaacctgcgcctggtgggcctgcacagccacatcggc
tcgcagatcttcgacgtcgccgggttcgagatcgccgcgcaccgcgtgatcggcctgctg
cgcgacgtggtcgccgagttcggcgtggagaagacctcgcagatgtccatcgtggatctc
ggtgggggactgggtatctcgtacctgccgcacgacgatccgccgcccatgaaggaactg
gccgacaagctgctggagatcgtgcgcaccgagtcggccgcggtcgggctgcccacgccc
aagctcgtggtggaacccggacgcgccatcgcgggcccgggcaccatcacgctctacgag
gtcggcacggtcaaggacgtggccgtcagccagaccgcgcaccgccgttacgtcagcgtc
gacggcggcatgagcgacaacatccgcacgtcgctgtacgccgcgcagtacgacgcccgg
ttggtgtcacgcgtcagcgacgctccgcccgcactggcgcggatcgtcggaaaacactgt
gagagtggcgatatcgtcgtccgcgacacctgggtgtccgacgacatcgcgcccggcgac
ctgatcggtgtcgccgcgaccggcgcgtactgctactcgatgtcgagtcgatacaacctg
ctgtgccgccccgctgtggtggccgtcgccgacggccaggcacgtctggtgctgcgacgg
gagaccgtcgaggatcttctgagcctggaggtgaagggtcaatga
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