Mycolicibacterium smegmatis MC2 155: MSMEG_5580
Help
Entry
MSMEG_5580 CDS
T00434
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MSMEG_5580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_5580
DNA repair and recombination proteins [BR:
msm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MSMEG_5580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
HC2
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ABK73702
UniProt:
A0R3S7
LinkDB
All DBs
Position
5668970..5669956
Genome browser
AA seq
328 aa
AA seq
DB search
MNRAVRHTGLMRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYKRVCEV
CGEVVEYRDINKAFESDDGQMVVITDEDIATLPEERSREIEVVEFIPAEQLDPLMYDKSY
FLEPDSKSSKSYVLLAKTLAETDRIAIVHFSLRNKSRLAALRVKDFSKRDVMMIHTLLWP
DEIRDPDFPILDKEVQIKPAELKMAGQVVESMTDDFKPDLYHDDYQEQLRELVQAKLEGG
EAFSVEEQPAELDEGTEDVSDLLAKLEASVKARKGGKSDSKDDSDSESDSKESKSDSKPA
KKAPAKKAAAKKSTAKKAPAKKAAAKKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgcggtacgccatactggccttatgcgatccatctggaagggttcgatcgcc
ttcggcctggtgaacgtgccggtcaaggtctacagcgcgaccgaggaccacgacatcaag
ttccatcaggtccacgccaaggacaacgggcgcattcgctacaagcgcgtgtgcgaagtc
tgcggcgaggtcgtcgagtaccgcgacatcaacaaggccttcgaatccgacgacggccag
atggtcgtgatcaccgacgaggacatcgcgacgctacccgaggaacgcagccgtgagatc
gaggtcgtcgagttcatcccggccgagcagctcgatccgctgatgtacgacaagagctac
ttccttgagcccgattcgaaatcgtcgaagtcgtacgtgctgctcgccaagacgctcgct
gagaccgaccggatcgcgatcgtgcacttctcgctgcgcaacaagtccaggctggcggcg
ctgcgtgtcaaggacttcagcaagcgcgacgtcatgatgatccacacgctgctgtggccc
gacgagatccgcgatcccgatttcccgatcctcgacaaggaagtgcagatcaaaccggcc
gagctcaagatggccgggcaggtcgtcgaatcgatgaccgacgacttcaaacccgacctg
taccacgacgactatcaggagcaactgcgcgagctggttcaggcgaaactggaaggcggc
gaggccttctcggtcgaagagcagcctgccgaactcgacgagggcaccgaggacgtctcc
gatctgctggccaagctcgaggccagcgtcaaggcgcgcaagggtggcaagtcggactca
aaggacgactccgattccgagtccgattcgaaggaatccaagtcggattccaagcccgcc
aaaaaggcccccgcgaagaaggcggccgccaagaaatccacggccaagaaggcgcccgcc
aagaaggcagctgcgaagaagtcgtag
DBGET
integrated database retrieval system
