Mycolicibacterium smegmatis MC2 155: MSMEG_5706
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Entry
MSMEG_5706 CDS
T00434
Name
(GenBank) DNA or RNA helicase of superfamily protein II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSMEG_5706
09124 Replication and repair
03420 Nucleotide excision repair
MSMEG_5706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msm03021
]
MSMEG_5706
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_5706
Enzymes [BR:
msm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSMEG_5706
Transcription machinery [BR:
msm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MSMEG_5706
DNA repair and recombination proteins [BR:
msm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MSMEG_5706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ABK70222
UniProt:
A0R451
LinkDB
All DBs
Position
5791025..5792782
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AA seq
585 aa
AA seq
DB search
MSLSAFSAPSARRTVCQRVRNNGQDEFPAEQRSGQRMTDGPLIVQSDKTVLLEVDHELAG
AARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVVDALVSFSRYPVPQPLLV
DIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVLRNKKIAPMLGARIDDDTVIVHNSE
RGRVKQMLLKIGWPAEDLAGYVDGEAHPITLEQDGWALRDYQEMAADSFWAGGSGVVVLP
CGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRELVARTSLTEDEIGEYSGEKKEIRP
VTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSRRRLGLTA
TLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVRVTMTDNERMLYATSEPD
ERYKLCSTVHTKIAVVRSILERHPNEPTLVIGAYLDQLEELGQELDAPVIQGSTKNAERE
ALFDAFRRGEIRTLVVSKVANFSIDLPEASVAVQVSGTFGSRQEEAQRLGRLLRPKADGG
GAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKDADDLLGPAI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgtccctcagtgcattctcggcgcccagcgcccgccggacggtatgtcagcgggttcgg
aataatggacaggatgagttcccagccgagcagcggagtggtcagcgcatgaccgatggc
ccgctgattgtgcagtccgacaaaaccgtgttgctcgaggtcgaccatgagttggccggg
gccgcacgggcggcgatcgccccgttcgccgaactcgaacgcgcacccgaacacgtccac
acctaccgcatcacgccgctggcgctgtggaacgcccgcgcggcgggccacgacgccgag
caggtggtcgacgcgctcgtgtcgttctcgcgctacccggtgccccagccgctgctggtc
gacatcgtcgacaccatggcgcggtacggccgcctgcagctcgtcaagcatccggcacac
gggctgacgctggtgagcttcgaccgcgcggtgctcgaagaggtgctgcgcaacaagaag
atcgcgccgatgctcggtgcgcgcatcgacgacgacaccgtgatcgtgcacaacagcgaa
cgcggccgcgtcaagcagatgctgctcaagatcggttggcccgcagaggatctcgcgggt
tacgtcgacggcgaggcgcacccgatcacgctggagcaggacggctgggcgctgcgcgac
taccaggagatggccgccgactcgttctgggccggcgggtccggtgtggtggtgctgccg
tgtggcgcgggcaagacgctcgtcggcgccgcggcgatggccaaggccggcgcgaccacg
ctgatcctggtgaccaacaccgtcgcgggacggcagtggaaacgcgagctcgtcgcgcgc
acgtcgctcaccgaggacgagatcggcgagtactcgggtgagaagaaggagatccggccc
gtcacgatcgccacgtaccaggtgatcacgcgccgcaccaagggcgagtacaagcacctg
gagctgttcgacagccgcgactggggcctgatcatctacgacgaggtgcacctgctgccc
gcgcccgtgttccggatgaccgccgatcttcagtcccgccgtcggctcggcctgaccgcg
acgctgatccgcgaggacgggcgtgaaggcgacgtgttcagcctgatcgggccgaaacgc
tacgacgcgccgtggaaggacatcgaggcgcagggctggatcgcgccggccgagtgcatc
gaggtgcgcgtgacgatgaccgacaacgagcgcatgctctacgccacgtcggaacccgac
gagcgctacaagctgtgctcgacggtgcacaccaagatcgcggtggtgcgctcgatcctg
gagcgtcatcccaacgagccgaccctggtgatcggcgcgtacctggaccaactggaggaa
ctgggccaggagttggacgccccggtgatccagggctcgaccaagaacgccgagcgcgag
gcgctgttcgacgcgttccgccgcggcgagatcaggacgctcgtggtgtcgaaggtcgcc
aacttctccatcgacctgccggaagcgtcggtggccgtgcaggtgtcgggcaccttcggg
tcacgacaggaggaggcgcaacgcctcggccggctgctgcgtccgaaggccgatggtggt
ggcgcggtgttctattcggtggtctcgcgcgacagcctcgacgccgagtacgccgcgcac
cggcagcgcttcctcgccgagcagggctacggctacatcatcaaagacgccgacgacctg
ctggggccggccatctag
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