Mycolicibacterium smegmatis MC2 155: MSMEG_5977
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Entry
MSMEG_5977 CDS
T00434
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm00521
Streptomycin biosynthesis
msm00523
Polyketide sugar unit biosynthesis
msm00541
Biosynthesis of various nucleotide sugars
msm01100
Metabolic pathways
msm01110
Biosynthesis of secondary metabolites
msm01250
Biosynthesis of nucleotide sugars
Module
msm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSMEG_5977 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSMEG_5977 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSMEG_5977 (rfbC)
Enzymes [BR:
msm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MSMEG_5977 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABK71839
UniProt:
A0R4W4
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All DBs
Position
6040647..6041201
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AA seq
184 aa
AA seq
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MRIEGADLADVLVLVPEPFRDERGLFTRTFDAHIFDDHLGRPGVSASFVQDSQSRSSQGV
VRGMHGRSERGEAKLVRCAHGAVHDVLVDIRPDSPTFGRQQAFLLDDKDFRHLYVPPGFL
HGFQALTAIADVCYRIDRPHDPSEDLAVAYNDPDLGIDWPLPVTMVSPRDAGAGSWSDLI
RHMS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatcgaaggtgcagacctcgccgacgtgctggttctcgttccggagccgttccgc
gatgagcgcggactgttcacccggacgttcgacgcccacatcttcgacgaccacctcggc
cgacccggcgtctcggcgtcgttcgtccaggactcccagtcccgttcgtcgcagggcgtc
gtgcggggcatgcacggccgctccgaacgaggcgaagccaagctcgtgcgttgcgcccac
ggcgccgtgcacgacgtccttgtcgacattcgcccggactcccccaccttcggccgccaa
caggcatttctgcttgacgataaggattttcggcatctgtacgtgccccccggttttctt
catggttttcaggctctgacggccatcgccgatgtgtgctaccggatcgaccgcccccac
gatccatccgaggatctcgccgttgcctacaacgaccccgacctcgggatcgactggccg
ctaccggtcacgatggtctccccgcgagacgccggtgccggaagctggtccgacctgatc
aggcatatgtcctga
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